DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17919 and mRpL38

DIOPT Version :10

Sequence 1:NP_649644.1 Gene:CG17919 / 40780 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster


Alignment Length:208 Identity:59/208 - (28%)
Similarity:90/208 - (43%) Gaps:38/208 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLAVQAGSVEEVFRSHQVVPDVIPEPPNQL----LKVTYSNNLVAKDGVELTPTQVKDQPVVEWD 72
            |:|...|..|.:|.|...||.|......||    |...|:.|::       .||:....|.:::|
  Fly   125 LVADHYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAPVYNGNVI-------KPTEAAKAPQIDFD 182

  Fly    73 ----------AQPGEFYTLIMTDPDAPSRAEPKFREFKHWILANIAGNDLASGEPIAEYIGSGPP 127
                      |....::||:.::|||  .......|..||.:|||....::.|:.:|||:...||
  Fly   183 GLVDPITGQAAGQDTYWTLVASNPDA--HYTNGTAECLHWFIANIPNGKVSEGQVLAEYLPPFPP 245

  Fly   128 QGTGLHRYVFLLYKQSGKLEF--------DEERVSKRSRKDRPKFSAAKFAINH-ELGNPIAGTF 183
            :|.|..|.||:||||..:|:.        |...:.||:      ||...|...| |...|....|
  Fly   246 RGVGYQRMVFVLYKQQARLDLGSYQLAAADYGNLEKRT------FSTLDFYRQHQEQLTPAGLAF 304

  Fly   184 YQAQYDDYVPKLH 196
            ||..:|:.:.:.:
  Fly   305 YQTNWDESLTQFY 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 47/167 (28%)
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 49/175 (28%)

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