DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG17919 and mRpL38

Sequence 1:NP_649644.1 Gene:CG17919 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_511152.2 Gene:mRpL38 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster

Alignment Length:208 Identity:59/209 (28%)
Similarity:90/209 (43%) Gaps:38/209 (18%)


  Fly    12 LLAVQAGSVEEVFRSHQVVPDVIPEPPNQL----LKVTYSNNLVAKDGVELTPTQVKDQPVVEWD 72
            |:|...|..|.:|.|...||.|......||    |...|:.|::       .||:....|.:::|
  Fly   125 LVADHYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAPVYNGNVI-------KPTEAAKAPQIDFD 182

  Fly    73 ----------AQPGEFYTLIMTDPDAPSRAEPKFREFKHWILANIAGNDLASGEPIAEYIGSGPP 127
                      |....::||:.::|||  .......|..||.:|||....::.|:.:|||:...||
  Fly   183 GLVDPITGQAAGQDTYWTLVASNPDA--HYTNGTAECLHWFIANIPNGKVSEGQVLAEYLPPFPP 245

  Fly   128 QGTGLHRYVFLLYKQSGKLEF--------DEERVSKRSRKDRPKFSAAKFAINH-ELGNPIAGTF 183
            :|.|..|.||:||||..:|:.        |...:.||:      ||...|...| |...|....|
  Fly   246 RGVGYQRMVFVLYKQQARLDLGSYQLAAADYGNLEKRT------FSTLDFYRQHQEQLTPAGLAF 304

  Fly   184 YQAQYDDYVPKLH 196
            ||..:|:.:.:.:
  Fly   305 YQTNWDESLTQFY 317

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 48/168 (29%)
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 50/176 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C86935658
eggNOG 1 0.900 E1_COG1881
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR11362
RoundUp 00.000 Not matched by this tool.
43.940

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