DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG17919 and mrpl-38

Sequence 1:NP_649644.1 Gene:CG17919 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_490808.1 Gene:mrpl-38 WormBaseID:WBGene00021327 Length:413 Species:Caenorhabditis elegans

Alignment Length:157 Identity:46/158 (29%)
Similarity:74/158 (47%) Gaps:8/158 (5%)


  Fly    40 QLLKVTYSNNLVAKDGVELTPTQVKDQP--VVEWDAQPGEFYTLIMTDPDAPSRAEPKFREFKHW 102
            |.|:|.:.|::|...|..:|......:|  .:|.....|.|.||:|.:.|..:....|..|...|
 Worm   155 QNLQVNFENDIVVHSGNVITANSTLKRPEITIESVGNGGGFNTLLMINLDGNALDLGKNGEIVQW 219

  Fly   103 ILANIA-GNDLASGEPIAEYIGSGPPQGTGLHRYVFLLYKQSGKLEFDEERVSKRSRKDRPKFSA 166
            :::||. |..:::|..|.:|:...|..|||.||..|:|::....::|..:..|..:|    ....
 Worm   220 MISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVLFRHEKPVDFQIQGNSLDTR----IHEI 280

  Fly   167 AKFAINHELG-NPIAGTFYQAQYDDYV 192
            :||...||.. .|.|..|:|..||:.|
 Worm   281 SKFYKKHEATITPSAIRFFQTSYDNSV 307

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 42/149 (28%)
mrpl-38NP_490808.1 PEBP_euk 156..301 CDD:176644 42/149 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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