DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17917 and mrpl38

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_998110.1 Gene:mrpl38 / 405881 ZFINID:ZDB-GENE-040426-2373 Length:345 Species:Danio rerio


Alignment Length:203 Identity:62/203 - (30%)
Similarity:94/203 - (46%) Gaps:19/203 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KSTRGVHQSDTEVSKIMRSLDVIPDVI---HIGPQEFLNVTY--HGHLAAHCGKVLEPMQVRDEP 69
            :.|.|.|    ::.::.....:..|:.   :..|:..|.:.|  ....|.|.|..|.|.|....|
Zfish   107 EKTNGPH----KIRRLAEHYGIYKDLFPMAYFTPRVMLRIGYGDDSSAAVHYGNHLTPSQAEQAP 167

  Fly    70 SVKWPSAPENYYALLMVDPDVPNAITPTHREFLHWMVLNIPGNLLALGDVRVGYMGATPLKGTGT 134
            .|.:.:..::.:.||:..||  ..:....:|:|||:|.||||..:|.||....|:...|.:|||.
Zfish   168 HVHYEAEEDSLWTLLLTSPD--EHLLDEEQEYLHWLVGNIPGRAVASGDQICPYLCPFPARGTGL 230

  Fly   135 HRFVFLLYKQRDYTKF--DFPKLPKHSVKGRSGFETKRFAKKYR-FGHPVAGNFFTSQWSPDVPS 196
            |||:|:|:||.....|  |...:|..|:|.|| |:|..|.:|:: ...|....||..||...|..
Zfish   231 HRFIFILFKQDALVDFASDVRPVPCESLKQRS-FQTLDFYRKHQDLITPAGLAFFQCQWDQSVTQ 294

  Fly   197 LIKAISHN 204
            ..    ||
Zfish   295 TF----HN 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 52/148 (35%)
mrpl38NP_998110.1 PEBP_euk 138..286 CDD:176644 52/150 (35%)

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