DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17917 and mrpl35

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001342831.1 Gene:mrpl35 / 2540365 PomBaseID:SPBC2F12.10 Length:308 Species:Schizosaccharomyces pombe


Alignment Length:192 Identity:43/192 - (22%)
Similarity:80/192 - (41%) Gaps:34/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DTEVSKIMRSLDVIPDVIHIGPQEFLNVTYHGHLAAHCGKVLEPMQVRDEPSVKWP-------SA 76
            |:.:.....|:||   .:...|:...::|        .|.:| |..|    :||.|       :.
pombe   120 DSGIGSFSPSVDV---QLGFNPENNDSIT--------PGTIL-PSTV----TVKTPWLSVLPFNC 168

  Fly    77 PENYYALLMVDPDVPNAITPTHREFLHWMVLNIP---GNLLALGDVRVGYMGATPL--KGTGTHR 136
            .:|:|:::.:|.||||..|.......:|::.|||   ...:.:...:..:....|:  :|...||
pombe   169 KKNHYSVITLDLDVPNYETNRFETHCNWLLTNIPIEASKRVPIDTSKAFFQYRPPIVHRGEDKHR 233

  Fly   137 FVFLLYKQRDYTKFDFPKLPKHSVKGRSGFETKRFAKKYRFGHPVAGNFFTSQWSPDVPSLI 198
            .:.|:.:|    |.....:|.:::. |..|:...|...|.. .||..:.:.|.|..|..:|:
pombe   234 ILTLVLRQ----KSSSISIPSNALV-RERFDLSEFCSIYDL-EPVGAHLWRSGWDSDAVALL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 34/155 (22%)
mrpl35NP_001342831.1 PEBP_euk 130..279 CDD:176644 37/170 (22%)

Return to query results.
Submit another query.