DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17917 and Pbp2

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001099226.1 Gene:Pbp2 / 246145 RGDID:621707 Length:187 Species:Rattus norvegicus


Alignment Length:165 Identity:68/165 - (41%)
Similarity:95/165 - (57%) Gaps:2/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PQEFLNVTYHGHLAAHCGKVLEPMQVRDEP-SVKWPSA-PENYYALLMVDPDVPNAITPTHREFL 102
            ||..|.|||.|...:..|:||.|.||::.| |:.|... |...|.|::.|||.|:...|.:||:.
  Rat    21 PQHLLRVTYAGAEVSELGQVLTPTQVKNRPSSITWDGLDPGKLYTLILTDPDAPSRKEPIYREWH 85

  Fly   103 HWMVLNIPGNLLALGDVRVGYMGATPLKGTGTHRFVFLLYKQRDYTKFDFPKLPKHSVKGRSGFE 167
            |::|:|:.||.::.|.|...|:|:.|.||||.||:|:|:|:|....|.|.|.|...|...|..|:
  Rat    86 HFLVVNMKGNDISSGKVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLKCDEPILTNRSGNQRGKFK 150

  Fly   168 TKRFAKKYRFGHPVAGNFFTSQWSPDVPSLIKAIS 202
            ...|.|||..|.||||..:.::|...||.|.|.:|
  Rat   151 AAAFRKKYHLGAPVAGTCYQAEWDSYVPKLYKQLS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 60/145 (41%)
Pbp2NP_001099226.1 PEBP_euk 23..171 CDD:176644 60/147 (41%)

Return to query results.
Submit another query.