DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17917 and Pebp1

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_061346.2 Gene:Pebp1 / 23980 MGIID:1344408 Length:187 Species:Mus musculus


Alignment Length:165 Identity:65/165 - (39%)
Similarity:90/165 - (54%) Gaps:2/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PQEFLNVTYHGHLAAHCGKVLEPMQVRDEP-SVKWPSA-PENYYALLMVDPDVPNAITPTHREFL 102
            ||..|.|.|.|......||||.|.||.:.| |:.|... |...|.|::.|||.|:...|..||:.
Mouse    21 PQHALRVDYAGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWH 85

  Fly   103 HWMVLNIPGNLLALGDVRVGYMGATPLKGTGTHRFVFLLYKQRDYTKFDFPKLPKHSVKGRSGFE 167
            |::|:|:.||.::.|.|...|:|:.|..|||.||:|:|:|:|......|.|.|...|...|..|:
Mouse    86 HFLVVNMKGNDISSGTVLSDYVGSGPPSGTGLHRYVWLVYEQEQPLSCDEPILSNKSGDNRGKFK 150

  Fly   168 TKRFAKKYRFGHPVAGNFFTSQWSPDVPSLIKAIS 202
            .:.|.|||..|.||||..:.::|...||.|.:.:|
Mouse   151 VETFRKKYNLGAPVAGTCYQAEWDDYVPKLYEQLS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 58/145 (40%)
Pebp1NP_061346.2 PEBP_euk 25..171 CDD:176644 58/145 (40%)
Interaction with RAF1. /evidence=ECO:0000250 93..134 16/40 (40%)

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