DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG17917 and mrpl-38

Sequence 1:NP_649642.1 Gene:CG17917 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_490808.1 Gene:mrpl-38 WormBaseID:WBGene00021327 Length:413 Species:Caenorhabditis elegans

Alignment Length:189 Identity:49/190 (26%)
Similarity:74/190 (39%) Gaps:22/190 (12%)


  Fly    19 DTEVSKIMRSLDVIP----DVIHIGPQEFLNVTYHGHLAAHCGKVLEPMQVRDEPSVKWPSAPE- 78
            |.|...|.|...|..    |.|.....:.|.|.:...:..|.|.|:........|.:...|... 
 Worm   128 DVENLSIYRHFQVFDHLFGDNIFFENVQNLQVNFENDIVVHSGNVITANSTLKRPEITIESVGNG 192

  Fly    79 -NYYALLMVDPDVPNAI-TPTHREFLHWMVLNIP-GNLLALGDVRVGYMGATPLKGTGTHRFVFL 140
             .:..|||::.| .||: ...:.|.:.||:.||| |..::.|...:.|:...|..|||.||..|:
 Worm   193 GGFNTLLMINLD-GNALDLGKNGEIVQWMISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFV 256

  Fly   141 LYKQRDYTKFDFPKLPKHSVKGRS----GFETKRFAKKYRFG-HPVAGNFFTSQWSPDV 194
            |::......|        .::|.|    ..|..:|.||:... .|.|..||.:.:...|
 Worm   257 LFRHEKPVDF--------QIQGNSLDTRIHEISKFYKKHEATITPSAIRFFQTSYDNSV 307

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 41/153 (27%)
mrpl-38NP_490808.1 PEBP_euk 156..301 CDD:176644 41/154 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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