DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and Tacr2

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_542946.1 Gene:Tacr2 / 25007 RGDID:3812 Length:390 Species:Rattus norvegicus


Alignment Length:347 Identity:94/347 - (27%)
Similarity:154/347 - (44%) Gaps:42/347 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GSRPL--DPVLIDRFLSN----RAVDSPWYHMLI--SMYGVLIVFGALGNTLVVIAVIRKPIMRT 119
            |:|.:  |..::....||    .|...|.:.:.:  :.|..|::....||..|:..::....|||
  Rat     2 GTRAIVSDANILSGLESNATGVTAFSMPGWQLALWATAYLALVLVAVTGNATVIWIILAHERMRT 66

  Fly   120 ARNLFILNLAISDLLLCLVTMPLTLMEILSKY--WPYGSCSILCKTIAMLQALCIFVSTISITAI 182
            ..|.||:|||::|  ||:.....|...|.:.:  |.:|..  .|....:.....:|||..|:|||
  Rat    67 VTNYFIINLALAD--LCMAAFNATFNFIYASHNIWYFGRA--FCYFQNLFPITAMFVSIYSMTAI 127

  Fly   183 AFDRYQVIVYPTRDSLQFVGAVTILAGIWALALLLASPLFVYKELINTDTPALLQQIGLQDTIPY 247
            |.|||..||:|.:..|.......|:||||.:||.||||...|            ..|.:.:....
  Rat   128 AADRYMAIVHPFQPRLSAPSTKAIIAGIWLVALALASPQCFY------------STITVDEGATK 180

  Fly   248 CIEDWPSRNG---RFYYSIFSLCVQYLVPILIVSVAYFGIYNKLKSRITVVAV---QASSAQ-RK 305
            |:..||:.||   ...|.:....:.|.:|:|::    ||.|:.:...:...||   ||..|. |.
  Rat   181 CVVAWPNDNGGKMLLLYHLVVFVLIYFLPLLVM----FGAYSVIGLTLWKRAVPRHQAHGANLRH 241

  Fly   306 VERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQSMLVR-YAICHMIGMSSACSN 369
            ::..::..:.   ::.:.:.|.:.|||.:.:.:....:........:.: |.....:.|||...|
  Rat   242 LQAKKKFVKA---MVLVVLTFAICWLPYHLYFILGTFQEDIYYHKFIQQVYLALFWLAMSSTMYN 303

  Fly   370 PLLYGWLNDNFRKEFQELLCRC 391
            |::|..||..||..|: |..||
  Rat   304 PIIYCCLNHRFRSGFR-LAFRC 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 83/307 (27%)
TM helix 1 88..114 CDD:320331 5/27 (19%)
TM helix 2 121..146 CDD:320331 10/24 (42%)
TM helix 3 161..191 CDD:320331 12/29 (41%)
TM helix 4 202..223 CDD:320331 11/20 (55%)
TM helix 5 258..287 CDD:320331 7/28 (25%)
TM helix 6 310..340 CDD:320331 4/29 (14%)
TM helix 7 352..377 CDD:320331 7/25 (28%)
Tacr2NP_542946.1 7tmA_SKR_NK2R 34..318 CDD:320670 83/306 (27%)
TM helix 1 35..61 CDD:320670 5/25 (20%)
TM helix 2 68..94 CDD:320670 11/27 (41%)
TM helix 3 106..136 CDD:320670 12/29 (41%)
TM helix 4 147..168 CDD:320670 11/20 (55%)
TM helix 5 194..223 CDD:320670 7/32 (22%)
TM helix 6 243..273 CDD:320670 4/32 (13%)
TM helix 7 286..311 CDD:320670 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..390
Blue background indicates that the domain is not in the aligned region.

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