DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NPFR and Pgr15l

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001028533.1 Gene:Pgr15l / 245526 MGIID:2676330 Length:456 Species:Mus musculus


Alignment Length:420 Identity:114/420 - (27%)
Similarity:201/420 - (47%) Gaps:83/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MNQTEPAQLADGEHLSGYASSSNSVRYLDDRHPLDYLDLGTVHALNTTAINTSDLNE------TG 63
            ::|.|.|....||::|...|       ::|:            :.|.|..|.::::.      ||
Mouse    12 LSQMESAIDWLGENISWVPS-------IEDQ------------SCNHTTQNGTNISSAEWGGPTG 57

  Fly    64 SRPLDPVLIDRFLSNRAVDSPWYHMLISM-----YGVLIVFGALGNTLVVIAVIRKPIMRTARNL 123
            |       :.|:|....      |::..:     |.|:||....||:||....::...::.:..|
Mouse    58 S-------VRRWLGGNP------HIMAKIVLTFAYAVIIVISLFGNSLVCQVFVKHKEIKKSTGL 109

  Fly   124 FILNLAISDLLLCLVTMPLTLMEILSKYWPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQ 188
            .|.||||||:|:.|:..|..|...||..|.:|  .|:|......|...:.|||:::.|:|.||::
Mouse   110 LIFNLAISDILIILLNSPFALARFLSGQWVFG--RIMCHVSRFAQYCSLHVSTLTLMAVAMDRHR 172

  Fly   189 VIVYPTRDSLQFVGAVTILAGIWALALLLASPLFVYKE---LINTDTPALLQQIGLQDTIPYCIE 250
            ||::|.:..|.....:.::|.||::|:.||.|..:|:.   |:|.|          .||..||:.
Mouse   173 VILHPMKPRLTHSQCLFVVAMIWSIAVFLALPHAIYQNLFTLVNMD----------GDTRSYCLP 227

  Fly   251 DWP------SRNGRFYYSIFSLCVQYLVPILIVSVAYFGIYNKLKSRITVV-AVQASSAQRKVER 308
            .:|      |:    |..:.:..:.|::|:|::.|.    |:.|..|:.:. |:..:||::.:..
Mouse   228 SFPGPSILVSK----YVDLGTFILLYILPLLVIVVT----YSHLGKRLWIQNAIGDASARQLMAH 284

  Fly   309 GRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQSMLVRYAICHMIGMSSACSNPLLY 373
            .::.|::..:||.|.::|.|.|.||||:.:.  :..:.|....::.||. |...|||.|.||.:|
Mouse   285 YQKRKKSIRMLILIVLVFAVCWFPLNFYVVL--ISSAGVENDSVLFYAF-HWFAMSSTCYNPFIY 346

  Fly   374 GWLNDNFRKEFQEL-------LCRCSDTNV 396
            .|||.:||.:.:.:       |..||::.|
Mouse   347 CWLNRSFRAKLRSISSFRMQSLFVCSNSQV 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 93/310 (30%)
TM helix 1 88..114 CDD:320331 8/30 (27%)
TM helix 2 121..146 CDD:320331 12/24 (50%)
TM helix 3 161..191 CDD:320331 10/29 (34%)
TM helix 4 202..223 CDD:320331 7/20 (35%)
TM helix 5 258..287 CDD:320331 6/28 (21%)
TM helix 6 310..340 CDD:320331 11/29 (38%)
TM helix 7 352..377 CDD:320331 11/24 (46%)
Pgr15lNP_001028533.1 7tmA_GPR83 73..357 CDD:320511 93/306 (30%)
TM helix 1 74..100 CDD:320511 8/25 (32%)
TM helix 2 107..132 CDD:320511 12/24 (50%)
TM helix 3 145..175 CDD:320511 10/29 (34%)
TM helix 4 186..207 CDD:320511 7/20 (35%)
TM helix 5 237..266 CDD:320511 8/36 (22%)
TM helix 6 286..316 CDD:320511 11/31 (35%)
TM helix 7 325..350 CDD:320511 11/25 (44%)

Return to query results.
Submit another query.