DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gasp and CG10154

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_648646.2 Gene:CG10154 / 39509 FlyBaseID:FBgn0036361 Length:316 Species:Drosophila melanogaster


Alignment Length:208 Identity:56/208 - (26%)
Similarity:78/208 - (37%) Gaps:57/208 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDRTELEPPITTPHCSRL 96
            :|.:|.||..|..|...|:.|.:||.::..     |:.||:...|||          ....||..
  Fly   140 YDNTCTKYVLCYYGKPVLRQCHDGLQYNNA-----TDRCDFPEYVDC----------VANDCSAT 189

  Fly    97 YGIFPDE-------NKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVANG-- 152
            :.  |::       ..|..::.|.||.|...||:|||||:...:.|.:|..| .|..:.||..  
  Fly   190 FQ--PEDIIYLGSKASCSKYYVCSNGHPWEQQCAPGLAYNPSCKCCDFAKNV-NCTIDAVARNIL 251

  Fly   153 -----------FSCPAAGELANAGSFSRHAHPEDCRK--YYICLEGVAREYGCPIGTVF--KIGD 202
                       ..||..|         .|..|...|:  ||.|:||......|..|..:  |:.|
  Fly   252 PYSRTPLRRADIKCPLMG---------THFFPHKSRRDAYYYCVEGRGVTLDCTPGLYYDPKVED 307

  Fly   203 SDGTGNCEDPEDV 215
                  |..||.|
  Fly   308 ------CRRPEFV 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 12/39 (31%)
CBM_14 97..144 CDD:426342 16/53 (30%)
CBM_14 170..218 CDD:426342 16/50 (32%)
CG10154NP_648646.2 CBM_14 130..181 CDD:426342 14/45 (31%)
CBM_14 197..239 CDD:426342 14/41 (34%)
ChtBD2 263..311 CDD:214696 16/62 (26%)

Return to query results.
Submit another query.