DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and obst-G

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:290 Identity:72/290 - (24%)
Similarity:109/290 - (37%) Gaps:71/290 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKFLVVFVALF----GAAVAQSSFKCPDDF------GFYPHDTSCDKYWKCDNGVSELKTCGNG 55
            ||.|.::.|.|.    ..||.|:.|......      |..|...||..|:.|.:|.:...||...
  Fly     1 MKLFGLLCVMLVLQESTLAVVQNGFAFKTSLCEGKNGGLLPMFGSCKGYYVCADGNAVTGTCEKN 65

  Fly    56 LAFDATDSKYLTENCDYLHNVDC-------------------GDRTEL---EPPITT-----PHC 93
            ..|:.     ||.:||...||||                   .|..|:   :||:|.     |..
  Fly    66 TLFNP-----LTLHCDDPDNVDCIFDGKDNIVDDTSSSESDEDDDEEMAKTDPPVTVKATKKPRP 125

  Fly    94 SRL--------YGIFPDEN-KCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPEC----- 144
            :.|        .|:...:| .|..::.|...:|....|.....:....|:||.|.:. :|     
  Fly   126 TTLDKMCAGKKDGVMLTKNGSCQEYYVCKAKKPHLRSCPDKQHFSPTRRICMKASEA-KCSGGTR 189

  Fly   145 KNEEVANGFSCPA--AGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDSDGTG 207
            :|:| ::|   ||  .|..::....|..||..||.|:.:|...:.....||.|..|.|    .|.
  Fly   190 ENKE-SDG---PATTGGVCSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCPTGLHFNI----ATS 246

  Fly   208 NCEDPEDVPGCEDYYGDLDLKS---IRKSE 234
            .|:.|: :..|:....:...||   :|||:
  Fly   247 RCDYPK-IAKCQTKLNESKSKSKKPVRKSK 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 14/56 (25%)
CBM_14 97..144 CDD:426342 10/47 (21%)
CBM_14 170..218 CDD:426342 14/47 (30%)
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 16/55 (29%)
CBM_14 132..184 CDD:426342 10/52 (19%)
CBM_14 204..256 CDD:426342 15/56 (27%)

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