DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and CG7252

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_648527.1 Gene:CG7252 / 39353 FlyBaseID:FBgn0036226 Length:474 Species:Drosophila melanogaster


Alignment Length:218 Identity:54/218 - (24%)
Similarity:85/218 - (38%) Gaps:54/218 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 CDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDC----GDRTELEPPITTPHCS-- 94
            |.::.:|:||.:|...|.:||.|:..     .::|||..||||    ...||:|.|..|. ||  
  Fly   190 CVRFIQCNNGCAEEFQCPSGLYFNTA-----IDDCDYWWNVDCTPTADGSTEIEGPSGTT-CSSQ 248

  Fly    95 -----RLYGIFPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVANGFS 154
                 :..|....:...:.|:.|....|....||.||.::..|:||.|   :.:.|:...::...
  Fly   249 GECAGKRDGYMIADPNSNGFFVCQCQCPIAMPCSEGLKFNETAQVCDW---IKDTKSAIGSSAVQ 310

  Fly   155 CPAAGELANAGSFSRHAHPED----------------------------CRKYYICLEGVAREYG 191
            |  .|:|....:..:..:||:                            |..:|.|....|.|..
  Fly   311 C--YGDLVYNATLDQCDYPENYVPKVECNTTSTVCQNQPEGELFPVEGKCNMFYKCNFNCAVEQY 373

  Fly   192 CPIGTVFKIGDSDGTGNCEDPED 214
            ||...|:    :..|..||.|:|
  Fly   374 CPNNLVY----NPNTEECEYPQD 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 10/35 (29%)
CBM_14 97..144 CDD:426342 12/46 (26%)
CBM_14 170..218 CDD:426342 15/73 (21%)
CG7252NP_648527.1 CBM_14 30..79 CDD:426342
CBM_14 175..226 CDD:426342 13/40 (33%)
CBM_14 251..296 CDD:426342 11/44 (25%)
CBM_14 343..394 CDD:426342 13/54 (24%)
CBM_14 420..471 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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