DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and CG5883

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_648526.2 Gene:CG5883 / 39352 FlyBaseID:FBgn0036225 Length:339 Species:Drosophila melanogaster


Alignment Length:269 Identity:55/269 - (20%)
Similarity:92/269 - (34%) Gaps:92/269 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GFYPHDTSCDKYWKCD-NGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDRTEL--EPPIT 89
            |:.....:|..::.|| :.:....||..|:.||     .::::|.|..:..|..:.|:  ..|:.
  Fly   101 GYIGDTINCANWYYCDADALLGKGTCNLGMYFD-----QVSKSCVYSEDTVCAAKYEICDVAPVG 160

  Fly    90 TPHCSRLYGIFPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQV-------PE--CK 145
            ||        |.|:..|..::.|.:.......|..||.|:.....|:....|       |:  |.
  Fly   161 TP--------FRDDANCHKYYTCSSKSLVENTCENGLYYNVATGTCVRKKDVICENHPLPDEVCG 217

  Fly   146 NEEVA--NGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTV----------- 197
            |:::|  |.|    ..::|.            ||.||.|     |:.|..|...           
  Fly   218 NKKLAVRNKF----VSDMAT------------CRGYYYC-----RDLGSGIPDTDPIYQQCDENN 261

  Fly   198 ----------------------------FKIGDSDGTGN---CED-PEDVP-GCEDYYGDLDLKS 229
                                        |::.:.||..:   |.| .|..| .|||.|.|:..::
  Fly   262 FFNQERQACMPRESQKCDYDRCDGRKDGFEVAEIDGCHHYIECVDGRETTPISCEDKYFDVVTQN 326

  Fly   230 IRKSELLAG 238
            ...:.|:.|
  Fly   327 CSSTHLVYG 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 10/44 (23%)
CBM_14 97..144 CDD:426342 11/55 (20%)
CBM_14 170..218 CDD:426342 15/91 (16%)
CG5883NP_648526.2 CBM_14 95..146 CDD:426342 11/49 (22%)
CBM_14 154..204 CDD:426342 12/57 (21%)

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