DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and CG4835

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster


Alignment Length:308 Identity:61/308 - (19%)
Similarity:90/308 - (29%) Gaps:107/308 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 CPD--DFGFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDC-GDRTEL 84
            |.|  |...:.:..:|.:|..|.:...::..|.....|   :...|.  ||...:|.| ||||..
  Fly   393 CKDEKDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLF---NPDLLV--CDEPDDVVCLGDRTTT 452

  Fly    85 EPPITTPHCS--------------------------RLYGIFPDENKCDVFWNCWNG-------- 115
            ..|.|.|..:                          .|...|...:.|..::.|..|        
  Fly   453 PIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQWTLAPC 517

  Fly   116 ------EPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVANGFS-------------------- 154
                  :||..||.|.:|.|             .||..:|....:                    
  Fly   518 IYGSYFDPSTGQCGPDVAPD-------------ACKPSQVTTTTTTTTTETTTTERNTTPKSTAT 569

  Fly   155 ---------CPAAGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDSDGTGNCE 210
                     .|..|...........|:|.:|.||.:|:..:...:.||.||.|    |.....|.
  Fly   570 TTERTTTTVAPKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFF----SSKLEKCI 630

  Fly   211 DPEDVPGCEDYYGDLDLKSIRKSELLAGLNSEGRTKGAPKTKAASSSS 258
            |..|...||   ||....::          ..|.|:..|:....::||
  Fly   631 DDWDESDCE---GDQSTTTL----------EPGYTRPPPEPTMCTNSS 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 10/50 (20%)
CBM_14 97..144 CDD:426342 11/60 (18%)
CBM_14 170..218 CDD:426342 15/47 (32%)
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 11/55 (20%)
CBM_14 485..539 CDD:426342 12/66 (18%)
CBM_14 585..638 CDD:426342 15/56 (27%)
CBM_14 661..714 CDD:426342 2/5 (40%)
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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