DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and obst-B

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster


Alignment Length:243 Identity:83/243 - (34%)
Similarity:126/243 - (51%) Gaps:22/243 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KCPDDFGFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDRTELEP 86
            :||:..||||....||||:.|.:||...:.|.:|:.|:  |...:.|.||..:|:||..|::|:.
  Fly    85 ECPEPNGFYPDSKQCDKYYACLDGVPTERLCADGMVFN--DYSPIEEKCDLPYNIDCMKRSKLQT 147

  Fly    87 PITTPHCSRLYGIFPDENK--CDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQ--VPECKNE 147
            |..:.||.|..|.|..|..  ||.|:.|.:|:.:...|..||.::....:|.|.||  |..||:|
  Fly   148 PQPSLHCPRKNGYFGHEKPGICDKFYFCVDGQFNMITCPAGLVFNPKTGICGWPDQVGVTGCKSE 212

  Fly   148 EVANGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEG-VAREYGCPIGTVFKIGDSDGTGNCED 211
            :|.: |.||...| :.|.:..|:|.|.||:.:|:|:.| :.|..||.:|.||    .:....|:.
  Fly   213 DVFD-FECPKVNE-SIAVTHPRYADPNDCQFFYVCVNGDLPRRNGCKLGQVF----DEEKETCDW 271

  Fly   212 PEDVPGCEDYYGD-LDLKSIRKSELLAGLNSEGR---TKGAPKTKAAS 255
            ...||.|.|:|.| |..|.:.:.|     |.:.:   ||..|:.:..|
  Fly   272 ARKVPDCADWYKDRLTDKELDELE-----NPKPKTTTTKRPPRVRGQS 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 19/49 (39%)
CBM_14 97..144 CDD:426342 16/50 (32%)
CBM_14 170..218 CDD:426342 16/48 (33%)
obst-BNP_609339.1 CBM_14 89..139 CDD:426342 19/51 (37%)
CBM_14 156..204 CDD:426342 15/47 (32%)
CBM_14 233..278 CDD:426342 16/48 (33%)

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