DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and obst-A

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_608378.2 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster


Alignment Length:243 Identity:89/243 - (36%)
Similarity:133/243 - (54%) Gaps:23/243 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKFL--VVFVALFGAAVAQSSFKCPDDFGFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDS 63
            ||.||  :.........|:.::|:||...|.:..:..|||::.||:||::.|.|.:||.||..:.
  Fly     1 MKLFLCAIAVTLCVATTVSAANFECPKPNGQFADEVQCDKFYVCDDGVAKAKLCPDGLVFDPLNR 65

  Fly    64 KYLTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIF--PDENKCDVFWNCWNGEPSRYQCSPGL 126
            |:  ..||...||||.|||||:.|.::.:|.|..|.|  ||...|::|:||..|:....:|:.||
  Fly    66 KF--NKCDQPFNVDCEDRTELQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETKCTVGL 128

  Fly   127 AYDRDARVCMWADQV------PECKNEEVANGFSC----PAAGELANAGSFSRHAHPEDCRKYYI 181
            .:|..:..|:|.|..      ||.:..|  .||.|    |...:.....:..::.||.||:|:|:
  Fly   129 HFDEYSGTCVWPDTAKREGCNPEQRTSE--TGFVCPKDQPKTDDRGQVVTHPKYPHPTDCQKFYV 191

  Fly   182 CLEGV-AREYGCPIGTVFKIGDSDGTGNCEDPEDVPGCEDYYGDLDLK 228
            ||.|. .|:.||.:|.|:    :|.|..|:.||:||||||:|.|:|.|
  Fly   192 CLNGEDPRDLGCQLGEVY----NDATEMCDAPENVPGCEDWYKDVDDK 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 19/50 (38%)
CBM_14 97..144 CDD:426342 17/54 (31%)
CBM_14 170..218 CDD:426342 21/48 (44%)
obst-ANP_608378.2 CBM_14 27..77 CDD:426342 18/51 (35%)
CBM_14 95..143 CDD:426342 17/47 (36%)
CBM_14 180..225 CDD:426342 21/48 (44%)

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