DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and LOC3289800

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_560209.2 Gene:LOC3289800 / 3289800 VectorBaseID:AGAMI1_007671 Length:228 Species:Anopheles gambiae


Alignment Length:227 Identity:84/227 - (37%)
Similarity:118/227 - (51%) Gaps:25/227 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FVALFG----AAVAQSSF----KCPDDFG--FYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATD 62
            |.||||    |.|||:|.    .||:.:|  .|.|...||:::.|.||...|:||.|||.||...
Mosquito     4 FGALFGLIGLALVAQASAAAAPSCPEPYGEQAYLHPDHCDQFFLCTNGTLTLETCENGLLFDGKG 68

  Fly    63 SKYLTENCDYLHNVDCGDR---TELEPPITTPHCSRLYGIFPDENKCDV-FWNCWNGEPSRYQCS 123
            :.:  .:|:|...||||.|   |: :.|::||.|..|:|::||..:|.. :..|..||..:..|.
Mosquito    69 AVH--NHCNYNWAVDCGSRKFATD-QTPLSTPGCEYLFGVYPDAAECSTSYHKCAFGEVHQELCE 130

  Fly   124 PGLAYDRDARVCMWADQVPECKNEEVANGFSCP---AAGEL-ANAGSFSRHAHPEDCRKYYICLE 184
            |||.||.....|.|.||:.:..|.|...||.||   .:|.: |....:.|:..|.||.:...|::
Mosquito   131 PGLVYDHRIHGCNWPDQLLDSCNPEAVVGFKCPQSVPSGTVAARFWPYPRYPVPGDCHRLITCVD 195

  Fly   185 GVAREYGCPIGTVFKIGDSDGTGNCEDPEDVP 216
            |..|...|..|.||    ::.:..||:|||||
Mosquito   196 GHPRLITCGEGKVF----NEESLTCENPEDVP 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 19/56 (34%)
CBM_14 97..144 CDD:426342 17/47 (36%)
CBM_14 170..218 CDD:426342 17/47 (36%)
LOC3289800XP_560209.2 CBM_14 32..82 CDD:426342 19/51 (37%)
CBM_14 104..150 CDD:426342 17/45 (38%)
CBM_14 181..223 CDD:426342 15/45 (33%)

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