DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Gasp and cpg-2

Sequence 1:NP_649611.2 Gene:Gasp FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans

Alignment Length:223 Identity:50/224 (22%)
Similarity:72/224 (32%) Gaps:47/224 (21%)


  Fly    28 GFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNV-DCGDRTELEPPITTP 91
            |.:|:......:..|..|::.:..|...|.|:.|   .|.  ||:..:| :|...     |...|
 Worm   253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL-----PTPQP 307

  Fly    92 HCSRLYGIFPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVANGFSCP 156
            .|.. .|.|........|..|.||......|..||.:......|.:...|.||  :|.:...|..
 Worm   308 TCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC--QETSGEESGE 369

  Fly   157 AAGELANAGS--------------------------FSRHAHPEDCR-KYYICLEGVAREYGCPI 194
            |:||.:..||                          .....|...|. :...|..|....:.||.
 Worm   370 ASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPS 434

  Fly   195 GTVFKIGDSDGTGNCEDPEDVPGC--ED 220
            ..||    :|.:..|:.|:....|  ||
 Worm   435 SLVF----NDQSLICDYPQTSLKCLIED 458

Known Domains:


GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 11/44 (25%)
CBM_14 98..144 CDD:279884 12/46 (26%)
CBM_14 170..218 CDD:279884 11/49 (22%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:279884
CBM_14 138..190 CDD:279884
ChtBD2 245..293 CDD:214696 11/45 (24%)
CBM_14 311..359 CDD:279884 12/49 (24%)
CBM_14 403..454 CDD:279884 11/55 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C50970
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR23301
Phylome 1 0.910 0.600 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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