DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment glob3 and mb

DIOPT Version :10

Sequence 1:NP_649597.3 Gene:glob3 / 40726 FlyBaseID:FBgn0037385 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_956880.1 Gene:mb / 393558 ZFINID:ZDB-GENE-040426-1430 Length:147 Species:Danio rerio


Alignment Length:125 Identity:24/125 - (19%)
Similarity:44/125 - (35%) Gaps:12/125 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QAWNLVRPFERRYGQDVFYSFLNDYYWGIKKF------RNGAELNVKALHSHALRFINFFGLLIE 104
            :.|..|.......|.:|......:|...:|.|      ..|......|:.:|....:...|.|::
Zfish     9 KCWGAVEADYAANGGEVLNRLFKEYPDTLKLFPKFSGISQGDLAGSPAVAAHGATVLKKLGELLK 73

  Fly   105 EKDPVVFQLMINDNNHTHNRCHVGSVNIGHLAQALVDYVLKVF-HKVSSPSLEQGLSKLV 163
            .|..  ...::....:||...|..::|...|   :.:.::||. .|....:..||..:.|
Zfish    74 AKGD--HAALLKPLANTHANIHKVALNNFRL---ITEVLVKVMAEKAGLDAAGQGALRRV 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob3NP_649597.3 Mb-like 44..169 CDD:381254 24/125 (19%)
mbNP_956880.1 Globin-like 2..147 CDD:473869 24/125 (19%)

Return to query results.
Submit another query.