DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob3 and ngb

DIOPT Version :9

Sequence 1:NP_649597.3 Gene:glob3 / 40726 FlyBaseID:FBgn0037385 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_571928.1 Gene:ngb / 100000711 ZFINID:ZDB-GENE-011102-1 Length:159 Species:Danio rerio


Alignment Length:28 Identity:8/28 - (28%)
Similarity:13/28 - (46%) Gaps:6/28 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FGPIKDEMGFTLSERL------ALRQAW 48
            |..:.:.:.:.|...|      :|||||
Zfish   108 FALVGESLLYMLQSSLGPAYTTSLRQAW 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob3NP_649597.3 Mb_like 44..169 CDD:271266 5/5 (100%)
ngbNP_571928.1 Globin 2..151 8/28 (29%)
Globin_like 4..150 CDD:328729 8/28 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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