DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec20 and Bnip1

DIOPT Version :10

Sequence 1:NP_649595.1 Gene:Sec20 / 40724 FlyBaseID:FBgn0037383 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_742161.4 Gene:Bnip1 / 224630 MGIID:109328 Length:228 Species:Mus musculus


Alignment Length:219 Identity:80/219 - (36%)
Similarity:130/219 - (59%) Gaps:11/219 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QDLIDNNLQAKAIIHDILNSRTSIAELEELNEAGRSKLSAIRKSIERLDDWAR----DTADSALA 73
            |:::..:|:.||:|.||.:....::||.|||...:.|...:::.|:.|:..||    ::....|.
Mouse    14 QEIVKFDLEVKALIQDIRDCSGPLSELTELNTKVKEKFQQLKQRIQELEQSAREQDKESEKQLLL 78

  Fly    74 NEVDDHRDQFSKTLQAFRKANVSTMLEIEKANREELMAITGESELRQRTTTRARHNQGSLVSQEN 138
            .||::|:.|......::||||::..|.|:...:.||  :.|...||||.||:.     ||....:
Mouse    79 QEVENHKKQMLSNQTSWRKANLTCKLAIDNLEKAEL--LQGGDSLRQRKTTKE-----SLAQTSS 136

  Fly   139 DVTEKMLAISRHLSETTQKSAITLETLVASSQNVEATSDELHHTAGSISMSGKLLKKYGRRECTD 203
            .:||.::.|||.:|:..|:|...::|||:||:.:...::|....:|:|.:..||:.||.|||.||
Mouse   137 SITESLMGISRMMSQQVQQSEEAMQTLVSSSRTLLDANEEFKSMSGTIQLGRKLITKYNRRELTD 201

  Fly   204 KMLLFFAFSLFLACVFYIVQKRLF 227
            |:|:|.|.:||||.|.|||:||||
Mouse   202 KLLIFLALALFLATVLYIVKKRLF 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec20NP_649595.1 Sec20 135..226 CDD:112708 38/90 (42%)
Bnip1NP_742161.4 Nup88 <11..147 CDD:462975 42/139 (30%)
SNARE_SEC20 132..224 CDD:277218 38/91 (42%)

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