DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMG1 and psmg1

DIOPT Version :10

Sequence 1:NP_649590.1 Gene:PSMG1 / 40719 FlyBaseID:FBgn0037378 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001002714.1 Gene:psmg1 / 436987 ZFINID:ZDB-GENE-040718-469 Length:277 Species:Danio rerio


Alignment Length:260 Identity:52/260 - (20%)
Similarity:86/260 - (33%) Gaps:82/260 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGELNIPSSRAFWDDCDED-------------ELENLKPVEKLQLKFDDDCDGEAAPVESEMLVV 57
            |||:....|||..:|..||             |:|..:.||...|....|     .|::...|::
Zfish     5 FGEVLSVYSRAVEEDEYEDMTNENEEDEQIRREIEEKRSVEVCWLLGSQD-----GPLQCSDLII 64

  Fly    58 IEGVNVTHFASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAIINEDLTSSGEVAELLLP----- 117
            ..|.|.:.|..:.|             .||:.|  ::...|:..||  .|.|.....::|     
Zfish    65 GAGPNASGFIRAYL-------------LSTVGW--TAVAWLSFWNE--RSRGSERPTVVPGPGEP 112

  Fly   118 --YVKLAKKVITLTLKPKVEFKSEDIQLYRDHIAVVRGIGANQKDIT------------------ 162
              .:...:...|:.:.....|.:|| ||::....|...:.....::|                  
Zfish   113 SCVLYRLESCPTVLICQCQGFVAED-QLFQFTEKVFSCVQTRDLNVTILSDCSSADYKTSDYLSG 176

  Fly   163 ---------------------ELEAPNFIAGVAAGVASWRDQMELPVTSFVIYTDKLPLDATAAQ 206
                                 .||.||..:|:||.|.|.....::....:..|:|.|..|:.:.|
Zfish   177 SSTPFLRCLKTSTYTHTVTCPPLEQPNICSGLAAAVLSHCQVHQISAVLYQCYSDVLHPDSASMQ 241

  Fly   207  206
            Zfish   242  241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMG1NP_649590.1 None
psmg1NP_001002714.1 PAC1 1..277 CDD:465018 52/260 (20%)

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