DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG2046 and Psmg1

Sequence 1:NP_649590.1 Gene:CG2046 FlyBaseID:FBgn0037378 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_008766793.1 Gene:Psmg1 RGDID:1305454 Length:306 Species:Rattus norvegicus

Alignment Length:110 Identity:28/111 (25%)
Similarity:48/111 (43%) Gaps:5/111 (5%)


  Fly   124 KVITLTLKPKVEFKSEDIQLYRDHIAVVRGIGANQ-KDITE---LEAPNFIAGVAAGVASWRDQM 184
            :|..||.:...|:|:.: ..|......:|.:...: ||...   ||.||.:.|::|.|.|:....
  Rat   181 QVTVLTCRHITEYKTCE-STYNLSSPFLRALKTQKFKDTVYCPLLEQPNIVHGLSAAVLSYCQVW 244

  Fly   185 ELPVTSFVIYTDKLPLDATAAQPVIKVLKAAGVACSSSYIPPRKE 229
            ::|...:|.|||.:.||....:....:..:..:.|....||...|
  Rat   245 KVPAVLYVCYTDVMKLDLVTVEAFKPIFSSRSLKCLVKNIPESTE 289

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG2046NP_649590.1 None
Psmg1XP_008766793.1 PAC1 63..305 CDD:292712 28/111 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1232038at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 LDO PTHR15069
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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