DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMG1 and psmg1

DIOPT Version :10

Sequence 1:NP_649590.1 Gene:PSMG1 / 40719 FlyBaseID:FBgn0037378 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001096329.1 Gene:psmg1 / 100124915 XenbaseID:XB-GENE-494236 Length:287 Species:Xenopus tropicalis


Alignment Length:276 Identity:60/276 - (21%)
Similarity:111/276 - (40%) Gaps:69/276 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGELNIPSSRAFWDDCD----EDELENLKPVEKLQLKFD-------------DDCDGEAAPVESE 53
            |||:....|||..:|.:    |:|.|:.:.:.:|:.|.:             :.......|..:.
 Frog     5 FGEVQSVFSRAVDEDDEEEEGEEEEEDREIIAELERKREVHVTWNPEVTAAIESSPNRRLPCSNV 69

  Fly    54 MLVVIEGVNVTHFASS-LLEKDAKRVC------------------AIPANNS-TLHWSHSSKQLL 98
            :|.|  |.|.|.|.|| :|...:..||                  ::||.:| |.:.|.:...:|
 Frog    70 ILSV--GDNATGFVSSYILSSGSWEVCGSITLWNERCRDCNPRKDSLPAPSSCTFYRSITDPTVL 132

  Fly    99 -----AIINED--------LTSSGEVAELLLPYVKLAKKVITLTLKPKVEFKSEDIQLYRDHIAV 150
                 :.|.||        :..|.|.:.|         .|..|:..|..|:|:.: ..|...:..
 Frog   133 LCQCNSYIAEDQLFQWCEKVFGSLEKSSL---------NVTVLSTCPVSEYKTPE-STYSLPVPF 187

  Fly   151 VRGIGANQ--KDI--TELEAPNFIAGVAAGVASWRDQMELPVTSFVIYTDKLPLDA---TAAQPV 208
            ::.:..::  :::  ..||.||...|:.|.|.::....::|...:..|||...||:   .|.:|:
 Frog   188 LKALRTSEYREEVPCPLLEQPNIADGLPAAVLTYCQVWQIPAVFYRCYTDLSKLDSITIDAFRPL 252

  Fly   209 IKVLKAAGVACSSSYI 224
            :...:.:.:|..|:.|
 Frog   253 LSCQRMSRLAADSAKI 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMG1NP_649590.1 None
psmg1NP_001096329.1 PAC1 1..287 CDD:465018 60/276 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 10/26 (38%)

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