DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1239 and bcdin3d

DIOPT Version :10

Sequence 1:NP_649577.1 Gene:CG1239 / 40706 FlyBaseID:FBgn0037368 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001410335.1 Gene:bcdin3d / 568375 ZFINID:ZDB-GENE-050208-327 Length:266 Species:Danio rerio


Alignment Length:241 Identity:63/241 - (26%)
Similarity:100/241 - (41%) Gaps:76/241 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PKKRLHLNGKP-MQNKDLNFKYGNYKHYYGKRILNKDFHDIRLDVLGTQPDLFRNKQLLDIGCNS 120
            |:.||.|..:. :||  :.|..|:     |:|:|                       :||:||||
Zfish    45 PENRLSLIPEALLQN--IGFTSGD-----GERVL-----------------------MLDVGCNS 79

  Fly   121 GHLSIQIARKFEVKS------------LVGLDIDRGLINDAQKTVSHLKRHATPGQGIPHIQFVH 173
            |.||:.:.:....|.            ::|.|:|:.||..||          |......:|||:.
Zfish    80 GDLSVALYKHLLNKEACTSDSPRQELYMLGFDLDQDLILRAQ----------TSNPFPQNIQFIP 134

  Fly   174 GNYVLEDDV---------LLEIERPQFDVILCLSVTKWIHLNFCDSGLKQAFRRMYLQLRPGGK- 228
            .:  :.||.         |.:....:|.:..|.:||.|:|||..|:    ||..:..:|....: 
Zfish   135 LD--ITDDTESRAVLQAFLGKFGCSRFHLSTCFAVTMWVHLNHGDA----AFLSLLSRLASHSEY 193

  Fly   229 LILEPQSFDGY----KRRKKLSEQIRDNYNAIKFRPD---HFTEYL 267
            |:||.|.:..|    :|.:||.....|::.|:|.|.|   |..|:|
Zfish   194 LLLEAQPWKCYRSAARRLRKLGRSDFDHFKALKIRGDMAAHAREHL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1239NP_649577.1 UbiG 90..232 CDD:441829 37/163 (23%)
Bin3 191..299 CDD:462022 28/85 (33%)
bcdin3dNP_001410335.1 Methyltransf_31 72..236 CDD:463998 50/179 (28%)
Bin3 164..265 CDD:462022 27/80 (34%)

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