DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1239 and bin3

DIOPT Version :10

Sequence 1:NP_649577.1 Gene:CG1239 / 40706 FlyBaseID:FBgn0037368 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_523626.2 Gene:bin3 / 35552 FlyBaseID:FBgn0263144 Length:1367 Species:Drosophila melanogaster


Alignment Length:357 Identity:123/357 - (34%)
Similarity:167/357 - (46%) Gaps:113/357 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VEATSRPPAQS-PKKRLHLNGKPMQNKDLNFKYGNYKHYYGKRILNKDFHDIRLDVLGTQPDLFR 109
            :|....||.:. ||.|.         ..|.::|||:..|...|.:| :|.|:||.|.....:||.
  Fly   766 LEPAKIPPIKMLPKFRA---------DGLKYRYGNFDRYVDFRQMN-EFRDVRLQVFQRHVELFE 820

  Fly   110 NKQLLDIGCNSGHLSIQIARKFEVKSLVGLDIDRGLINDAQKTVSHL------------------ 156
            ||.:||||||.||::|.:||....|::||:||||.|:..|::.:|..                  
  Fly   821 NKDILDIGCNVGHMTITVARHLAPKTIVGIDIDRELVARARRNLSIFVRIPKEEKLLEVKAEPTV 885

  Fly   157 -----------------------KRHATPGQGIPH------------------------------ 168
                                   ||.....|||.|                              
  Fly   886 DAKANIAVKDETSGAAHKKTRRGKRRRKVHQGIHHHHHHHHDLEQLQQQQKLNSLLVKPHEFFPI 950

  Fly   169 -------------------------------IQFVHGNYVLEDDVLLEIERPQFDVILCLSVTKW 202
                                           :.|.|.||||:|:.|:..:..|:|:|||||||||
  Fly   951 SFPLTYGRIPRILSSSKSPNMLGNKNQFPANVFFRHTNYVLKDESLMASDTQQYDLILCLSVTKW 1015

  Fly   203 IHLNFCDSGLKQAFRRMYLQLRPGGKLILEPQSFDGYKRRKKLSEQIRDNYNAIKFRPDHFTEYL 267
            |||||.|:|||.||:||:.|||||||||||.|::..||::|.|:.:|.:||..|:|.|:.|.|||
  Fly  1016 IHLNFGDNGLKMAFKRMFNQLRPGGKLILEAQNWASYKKKKNLTPEIYNNYKQIEFFPNKFHEYL 1080

  Fly   268 LSPEVGFAEMKLMGIPEHCKVGFKRPIQIFTK 299
            ||.||||:....:|:|.|...||.||||::.|
  Fly  1081 LSSEVGFSHSYTLGVPRHMNKGFCRPIQLYAK 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1239NP_649577.1 UbiG 90..232 CDD:441829 78/243 (32%)
Bin3 191..299 CDD:462022 64/107 (60%)
bin3NP_523626.2 PRK07764 <426..>559 CDD:236090
Cfa 783..>862 CDD:441831 36/79 (46%)
Tam 824..>864 CDD:443282 20/39 (51%)
Bin3 1004..1112 CDD:462022 64/107 (60%)
Blue background indicates that the domain is not in the aligned region.

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