Protein Alignment Rab23 and RAB1C

DIOPT Version :10

• Sequence 1: NP_649574.1
• Gene: Rab23 / 40701
• FlyBaseID: FBgn0037364
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: NP_193486.1
• Gene: RAB1C / 827468
• AraportID: AT4G17530
• Length: 202
• Species: Arabidopsis thaliana
• Alignment Length: 198
• Identity: 66/198 - (33%)
• Similarity: 103/198 - (52%)
• Gaps: 18/198 - (9%)

  Fly    23 QYNYTSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVR 87
            :|:|          ..|::::|:.|||||.::.|:....:...|..||||||..|.:|.||:.::
plant     4 EYDY----------LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIK 58

  Fly    88 IMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNE-IPTVIVQNKI 151
            :.:|||||||.|..||.:|||||...::.:..||..||:.:|.|..:::...:| :..::|.||.
plant    59 LQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123

  Fly   152 DLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSS 216
            ||..|.||:.:..:..|..|....:.||.|...||...|..:..   .:.|:...|.||    .|
plant   124 DLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTA---AIKTRMASQPAG----GS 181

  Fly   217 HPP 219
            .||
plant   182 KPP 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab23	NP_649574.1	Rab23_like	50..197	CDD:133306	52/147 (35%)
RAB1C	NP_193486.1	Rab1_Ypt1	7..172	CDD:206661	58/177 (33%)