DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and rab31

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_697248.2 Gene:rab31 / 568800 ZFINID:ZDB-GENE-140106-13 Length:194 Species:Danio rerio


Alignment Length:183 Identity:55/183 - (30%)
Similarity:94/183 - (51%) Gaps:1/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEFDCI 102
            :||.::|:.||||||::.|:.:..|..:...|||..||.:.:....|..:.::|||||||.|..:
Zfish     6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQERFHSL 70

  Fly   103 TKAYYRGAQASVLVFSTTDRASFDAIKDWKRKV-ENECNEIPTVIVQNKIDLIEQAVVTADEVET 166
            ...||||:.|:|:|:..|...||..:|.|.::: |:...:|...|..||.||.:...|...|.:.
Zfish    71 APMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPTKEAKE 135

  Fly   167 LAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSSHPP 219
            .|:.:....:.||.:..:|:..:|:.::.:...|.....|.....:.....||
Zfish   136 FAESIAAIFMETSARNAVNIEELFQKISRQIPPLENTDADSHDSFKLTRQPPP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 45/147 (31%)
rab31XP_697248.2 Rab5_related 5..167 CDD:206653 51/160 (32%)

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