DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and rab7a

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_957222.1 Gene:rab7a / 393902 ZFINID:ZDB-GENE-040426-1352 Length:207 Species:Danio rerio


Alignment Length:169 Identity:63/169 - (37%)
Similarity:90/169 - (53%) Gaps:13/169 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEF 99
            ::.:||:|:|:.||||:|::.:|....|:..||.|||.|||.:::.:|...|.:.:|||||||.|
Zfish     6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70

  Fly   100 DCITKAYYRGAQASVLVFSTTDRASFDAIKDWK---------RKVENECNEIPTVIVQNKIDLIE 155
            ..:..|:||||...||||..|...:|..:..|:         |..||    .|.|::.|||||..
Zfish    71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN----FPFVVLGNKIDLEN 131

  Fly   156 QAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLA 194
            :.|.|...........|.....||.||.|||...|:.:|
Zfish   132 RQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIA 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 56/154 (36%)
rab7aNP_957222.1 Rab7 9..179 CDD:206655 63/166 (38%)

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