DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and Rab22a

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_063140363.1 Gene:Rab22a / 366265 RGDID:1311959 Length:201 Species:Rattus norvegicus


Alignment Length:198 Identity:55/198 - (27%)
Similarity:103/198 - (52%) Gaps:16/198 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWD 92
            ::||      :||.::|:.||||||::.|:.:..|..:...|||..|:.:.::...|..:.::||
  Rat     2 ALRE------LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 60

  Fly    93 TAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNEIPTVIVQ---NKIDLI 154
            |||||.|..:...||||:.|:::|:..|...:|..:|:|.|::..  :..|:::|.   ||.||.
  Rat    61 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQ--HGPPSIVVAIAGNKCDLT 123

  Fly   155 EQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVF-----RYLATKCHQLMTQSYDQVAGNQQN 214
            :...|...:.:..|..::...:.||.|..||:..:|     .:..::...|::....|...:..:
  Rat   124 DVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISKYHCVSQVSSLLSSGQTQTQCSLSH 188

  Fly   215 SSH 217
            .||
  Rat   189 KSH 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 43/154 (28%)
Rab22aXP_063140363.1 None

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