DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and Rab9

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster


Alignment Length:171 Identity:57/171 - (33%)
Similarity:96/171 - (56%) Gaps:8/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLW 91
            |:||.......:||||:|:||||||:::.|:....:.::...||||:|:.:.|.:|||...:.:|
  Fly     2 TNMRPPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIW 66

  Fly    92 DTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVEN----ECNEIPTVIVQNKID 152
            ||||||.|..:...:|||:...:|.::..||.|...:..|:.:..|    :.::.|.::|.||.|
  Fly    67 DTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKND 131

  Fly   153 L-IEQAVVTADEVE--TLAKLLNCRLIRTSVKEDINVASVF 190
            : .::..|::|.|:  ...:.:.|. |.||.|...||...|
  Fly   132 IPAQKRQVSSDAVQQWCAEQKVACH-IETSSKAATNVTDAF 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 45/148 (30%)
Rab9NP_609966.1 Rab9 8..178 CDD:206697 54/165 (33%)

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