DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and Rab31

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_659562.2 Gene:Rab31 / 246324 RGDID:628598 Length:195 Species:Rattus norvegicus


Alignment Length:155 Identity:51/155 - (32%)
Similarity:87/155 - (56%) Gaps:1/155 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEFDCI 102
            :||.::|:.||||||::.|:.:..|..:...|||..|:.:.:....|..:.::|||||||.|..:
  Rat     7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSL 71

  Fly   103 TKAYYRGAQASVLVFSTTDRASFDAIKDWKRKV-ENECNEIPTVIVQNKIDLIEQAVVTADEVET 166
            ...||||:.|:|:|:..|.:.||..:|.|.::: |:....|...|..||.||.:...|...:.:.
  Rat    72 APMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 136

  Fly   167 LAKLLNCRLIRTSVKEDINVASVFR 191
            .|:.:...::.||.|..||:..:|:
  Rat   137 YAESIGALVVETSAKNAINIEELFQ 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 45/143 (31%)
Rab31NP_659562.2 Rab5_related 6..168 CDD:206653 51/155 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 30..42 4/11 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 63..79 8/15 (53%)

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