DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and Rab3

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_061508108.1 Gene:Rab3 / 1274970 VectorBaseID:AGAMI1_012080 Length:244 Species:Anopheles gambiae


Alignment Length:231 Identity:68/231 - (29%)
Similarity:116/231 - (50%) Gaps:26/231 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RLIQTATGGAAASVLQTHSQAQYNYTSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDY 66
            ::||:..||......:..|...::|          ..|::|:||..|||:|.:.||....||..:
Mosquito    19 KVIQSMAGGGDPKWQKDASDQNFDY----------MFKLLIIGNSSVGKTSFLFRYADDSFTSAF 73

  Fly    67 KKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDW 131
            ..|:|:||..:.:....:.|::.:|||||||.:..||.||||||...:|::..|:..||::::||
Mosquito    74 VSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 138

  Fly   132 KRKVEN-ECNEIPTVIVQNKIDLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLAT 195
            ..:::. ..:....::|.||.|:.::.|::.:..:.||..|......||.||:::|..||..|..
Mosquito   139 VTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADQLGVEFFETSAKENVHVTDVFERLVD 203

  Fly   196 KCHQLMTQSYDQVAGNQQNSSHPPYSSTPTISAFSP 231
            .....|::|.|               |.||:.|..|
Mosquito   204 IICDKMSESLD---------------SDPTLVAGGP 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 48/147 (33%)
Rab3XP_061508108.1 None

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