DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab23 and Rab23

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_061512129.1 Gene:Rab23 / 1271192 VectorBaseID:AGAMI1_000298 Length:223 Species:Anopheles gambiae


Alignment Length:241 Identity:170/241 - (70%)
Similarity:198/241 - (82%) Gaps:21/241 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDT 93
            |.|:::|:|:||::||||||||:||:|||||||:|||||||||||||||||||||||:|||||||
Mosquito     1 MLEEELEIALKVIVVGNGGVGKTSMVQRYCKGIYTKDYKKTIGVDFLERQIEIDGEDIRIMLWDT 65

  Fly    94 AGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNEIPTVIVQNKIDLIEQAV 158
            |||||||.|||||||||||.||.|||||||||:||::|||||||||:|||||:|||||||::|||
Mosquito    66 AGQEEFDAITKAYYRGAQACVLTFSTTDRASFEAIREWKRKVENECSEIPTVLVQNKIDLMDQAV 130

  Fly   159 VTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSSHPPYSST 223
            |:.:|.|.||..|.|||||||||||:|||:|||||||||||:|.|.|.|.|         |.|. 
Mosquito   131 VSFEEAEALAYSLGCRLIRTSVKEDVNVATVFRYLATKCHQMMKQQYSQSA---------PISQ- 185

  Fly   224 PTISAFSPTF-TKSSSGTIVL-RPAKKGHGSSVARKRKIVLKKCGI 267
            |||||||||| :|::|.||.| ||..         |||.:.|:|||
Mosquito   186 PTISAFSPTFQSKAASNTITLTRPLV---------KRKPLQKRCGI 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 122/146 (84%)
Rab23XP_061512129.1 None

Return to query results.
Submit another query.