DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG12171 and SDR3

Sequence 1:NP_649563.1 Gene:CG12171 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_182235.1 Gene:SDR3 AraportID:AT2G47130 Length:257 Species:Arabidopsis thaliana

Alignment Length:255 Identity:87/256 (34%)
Similarity:130/256 (51%) Gaps:12/256 (5%)


  Fly     7 KVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQI-VAAGGAPALQVAADINSESD 70
            |:.|:||.:|||||....|....|..:.||    |...|..:.: |:.|...|.....|:.:|.:
plant     9 KIAIITGGASGIGAEAVRLFTDHGAKVVIV----DFQEELGQNVAVSVGKDKASFYRCDVTNEKE 69

  Fly    71 VQGIVSATLAKHGRIDVLVNNAGILEL-GSIENTSLEQFDRVMNTNVRSLYQLTHLVTPELIK-- 132
            |:..|..|:.|:|::|||.:|||::|. ||..:.:||||||.|..|||............:::  
plant    70 VENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIKHAARAMVEKG 134

  Fly   133 TKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVIITELQRRGG 197
            |:|:||..:||......||..||..||.|:....:.....|...|:|||.|.|..:.|.:..|  
plant   135 TRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVNGVAPYAVATAINSR-- 197

  Fly   198 LDQEAYVKFLEHAKVTHAL-GRPGEVKEVAAAIAFLASDEASFSTGISLPVDGGRHAMCP 256
             |:|......|::..|..| |...:.:.||.|..|||||::::.:|.:|.||||...:.|
plant   198 -DEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQNLAVDGGYSVVKP 256

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 fabG 2..251 CDD:235975 86/249 (35%)
NADB_Rossmann 4..254 CDD:304358 86/252 (34%)
SDR3NP_182235.1 PLN02253 1..254 CDD:177895 86/252 (34%)
NADB_Rossmann 5..252 CDD:304358 86/250 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 1 1.000 T32102
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.