DRSC/TRiP Functional Genomics Resources

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Protein Alignment noi and sf3a3

DIOPT Version :10

Sequence 1:NP_477114.1 Gene:noi / 40678 FlyBaseID:FBgn0014366 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001017118.1 Gene:sf3a3 / 549872 XenbaseID:XB-GENE-947674 Length:501 Species:Xenopus tropicalis


Alignment Length:510 Identity:335/510 - (65%)
Similarity:412/510 - (80%) Gaps:16/510 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKD 65
            |||:||||||..||:|||:.:|..|..:|||..:|:|:|:||.:.:::.:...:|.|||||||||
 Frog     1 METILEQQRRYQEEKERLMDVMSKEMMSKKPTLREQINSDHRARAMLDQYMEVSSNLRDLYEDKD 65

  Fly    66 NERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSVEFDEMIRVYNNP-DDMSALVEF 129
            ..||.|:.|:||||||.|||.|||.||:|::.||.|:.||:||||||:::...|| ::...||||
 Frog    66 GLRKEELTAISGPNEFGEFYNRLKLIKEFHRKHPNEICVPMSVEFDELLKTRENPSEEAQNLVEF 130

  Fly   130 TDEEGGGRYLDLNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHH 194
            |||||.|||:||::||..|:||:|.|||||||||.:||.:||||:||||.||:.|:|.|.:||..
 Frog   131 TDEEGYGRYMDLHDCYLKYINLKSSEKLDYITYLATFDQLFDIPKERKNAEYKRYLEVLLEYLQD 195

  Fly   195 FILRIQPLLDLEGELL-KVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASL 258
            :..|::||.| :.||. |::::|:::|..|.|||:. |||.|||.:.||||||||||||||||||
 Frog   196 YTDRVKPLQD-QNELFGKIQIEFEKKWEAGAFPGWP-KETSSALTHAGAHLDLSAFSSWEELASL 258

  Fly   259 GLDRLKSALVALGLKCGGTLEERAQRLFSTKGKS--TLDPALMAKKPSAKTASAQSREHERHKEI 321
            |||||||||:||||||||||||||||||||||||  :|||:|.||.|.||   ...|:.|::|:|
 Frog   259 GLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSLFAKNPKAK---GTRRDTEKNKDI 320

  Fly   322 AQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSD---VEASESDNEDDPDADDVPYNPK 383
            |.|||.:|:|.::|.|||..|.|||||||||||.||::.:   :..||||:||    :::.||||
 Frog   321 AFLEAQVYEYVEILGEQRHLTHENVQRKQARTGEEREEEEEEQISESESDDED----NEIIYNPK 381

  Fly   384 NLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHF 448
            |||||||||||||||||||||||:|||||||||||:|||||||||||||||||||||||||||||
 Frog   382 NLPLGWDGKPIPYWLYKLHGLNINYNCEICGNFTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHF 446

  Fly   449 ANVTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
            |||||||||::||.|||.||.||||..|.|||:|||.|||||:||:|||||||||
 Frog   447 ANVTQIEDAVSLWSKLKHQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noiNP_477114.1 PRP9 2..503 CDD:227515 332/507 (65%)
SF3a60_Prp9_C 384..503 CDD:432197 104/118 (88%)
sf3a3NP_001017118.1 PRP9 2..501 CDD:227515 332/507 (65%)
SF3a60_Prp9_C 382..501 CDD:432197 104/118 (88%)

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