DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRMP and dpysl3

DIOPT Version :10

Sequence 1:NP_730954.2 Gene:CRMP / 40675 FlyBaseID:FBgn0023023 Length:594 Species:Drosophila melanogaster
Sequence 2:XP_068071967.1 Gene:dpysl3 / 553166 ZFINID:ZDB-GENE-050720-2 Length:661 Species:Danio rerio


Alignment Length:584 Identity:282/584 - (48%)
Similarity:375/584 - (64%) Gaps:50/584 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RVYIKNGEIVNHDKSFKADVYIEDGIIKFVGPSSEITIPGGVRTIDASGLMIIPGGIDPHTHMQL 85
            |:.||.|.|||.|:||.||:|:|||:||.:|  ..:.:||||:||:|:|.|:||||||.|||:|:
Zfish   110 RLLIKGGRIVNDDQSFYADIYMEDGVIKQIG--DNLIVPGGVKTIEANGKMVIPGGIDIHTHLQM 172

  Fly    86 PFGGAVAVDDFYHGTKAAVAGGTTMIIDFVLPNKHESMIEAYDKWRSWADPKVCCDYGLHVGITW 150
            ||.|....|||..|||||:|||||||:|.|:|....|::||:|:|..|||.|.||||.|||.||.
Zfish   173 PFRGTTTADDFTQGTKAALAGGTTMIVDHVIPEPGCSLLEAFDRWSKWADEKACCDYSLHVDITH 237

  Fly   151 WSKSVSEEIGILCKELGVNSFKTFMAYKGLYQLNDSDLLDVFERIRHLNGVAMVHAENGDIIAKN 215
            |:.||.:|:..|.||.|||||:.:||:|.|||:::::|.:||..:....|:|.||||||:|||:.
Zfish   238 WNDSVKQEVETLIKEKGVNSFQVYMAFKDLYQMSNTELYEVFTFLGEHGGIAQVHAENGEIIAEE 302

  Fly   216 TQRLLAEGINGPEGHELSRPEEVEAEAVHRACVLAHQADCPLYVVHVMSKSAGIELARARHRYRG 280
            ..|:|..||.|||||.||||||:|||||.||..:|.|.:|||||..||||||...:::||.  :|
Zfish   303 QARMLEMGITGPEGHVLSRPEELEAEAVFRAVTIASQTNCPLYVTRVMSKSAADIISQARK--KG 365

  Fly   281 RYIMGETLAAALGTDATCCQHLGFDAEAAHVLSPPLRPDKTTPEFLMKLLANDDLQLTGSDNCTF 345
            ..:.||.:.|:||||.|......:...|:.|.||||.||.|||::|..|||:.||.:.||.:|||
Zfish   366 NVVFGEPITASLGTDGTHYWSKNWAKAASFVTSPPLSPDPTTPDYLNTLLASGDLSVVGSAHCTF 430

  Fly   346 NKEHKALGKGDFTKIPNGVNGVEDRMSLVWEKGVHAGLLDPCRFVAVTSTNAAKIFNIYPQKGRI 410
            :...||:||.|||:||.||||.|:|||::|:|.|..|.:|...||||||||||||.|:||:||||
Zfish   431 SVAQKAIGKDDFTQIPEGVNGAEERMSIIWDKAVVTGKMDENMFVAVTSTNAAKILNLYPRKGRI 495

  Fly   411 AVGSDADIVIWNPNATRTISKDTHHHACDFNIFEGMTVHGVCEFVLVRGRICAERGNVRVAEGFG 475
            |||||:|:|||:.:|.|||:..|||.|.::|:||||.:.|....|:.:|:|..|.||:....|.|
Zfish   496 AVGSDSDLVIWDTDAVRTITAKTHHSAAEYNVFEGMELRGAPMLVVCQGKIVLEDGNLHATSGTG 560

  Fly   476 RFIPTPVRPPFVYDIIEGKVQ-----SQPEEQHEEKQNGSMAKRFAELDIQIPVQEPISAMLAGN 535
            ||||....|.|.|..::.:.|     :.|...::.                 ||.| .|.|..| 
Zfish   561 RFIPCSPFPDFAYKRVKARKQLAILKAVPRGMYDG-----------------PVSE-FSPMSRG- 606

  Fly   536 LAMPAEGSLCSTPSVRGRVDGK----RDLQESSFSIS--EE--LDRSGVRACIKVKNPPGGKSS 591
                      .|||...|....    |:|.:|.|::|  ||  :..:|.|..:    ||||:|:
Zfish   607 ----------GTPSASTRTSPTKVPVRNLHQSGFTLSGPEEAPIRPAGRRIVV----PPGGRSN 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRMPNP_730954.2 D-HYD 22..475 CDD:238639 247/452 (55%)
dpysl3XP_068071967.1 D-HYD 111..560 CDD:238639 247/452 (55%)

Return to query results.
Submit another query.