DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRMP and dpysl3

DIOPT Version :9

Sequence 1:NP_730954.2 Gene:CRMP / 40675 FlyBaseID:FBgn0023023 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001018348.1 Gene:dpysl3 / 553166 ZFINID:ZDB-GENE-050720-2 Length:567 Species:Danio rerio


Alignment Length:596 Identity:284/596 - (47%)
Similarity:379/596 - (63%) Gaps:53/596 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KKVPIHLQSAQNRVYIKNGEIVNHDKSFKADVYIEDGIIKFVGPSSEITIPGGVRTIDASGLMII 73
            |.:|   :....|:.||.|.|||.|:||.||:|:|||:||.:|  ..:.:||||:||:|:|.|:|
Zfish     7 KNIP---KITSERLLIKGGRIVNDDQSFYADIYMEDGVIKQIG--DNLIVPGGVKTIEANGKMVI 66

  Fly    74 PGGIDPHTHMQLPFGGAVAVDDFYHGTKAAVAGGTTMIIDFVLPNKHESMIEAYDKWRSWADPKV 138
            |||||.|||:|:||.|....|||..|||||:|||||||:|.|:|....|::||:|:|..|||.|.
Zfish    67 PGGIDIHTHLQMPFRGTTTADDFTQGTKAALAGGTTMIVDHVIPEPGCSLLEAFDRWSKWADEKA 131

  Fly   139 CCDYGLHVGITWWSKSVSEEIGILCKELGVNSFKTFMAYKGLYQLNDSDLLDVFERIRHLNGVAM 203
            ||||.|||.||.|:.||.:|:..|.||.|||||:.:||:|.|||:::::|.:||..:....|:|.
Zfish   132 CCDYSLHVDITHWNDSVKQEVETLIKEKGVNSFQVYMAFKDLYQMSNTELYEVFTFLGEHGGIAQ 196

  Fly   204 VHAENGDIIAKNTQRLLAEGINGPEGHELSRPEEVEAEAVHRACVLAHQADCPLYVVHVMSKSAG 268
            ||||||:|||:...|:|..||.|||||.||||||:|||||.||..:|.|.:|||||..||||||.
Zfish   197 VHAENGEIIAEEQARMLEMGITGPEGHVLSRPEELEAEAVFRAVTIASQTNCPLYVTRVMSKSAA 261

  Fly   269 IELARARHRYRGRYIMGETLAAALGTDATCCQHLGFDAEAAHVLSPPLRPDKTTPEFLMKLLAND 333
            ..:::||.  :|..:.||.:.|:||||.|......:...|:.|.||||.||.|||::|..|||:.
Zfish   262 DIISQARK--KGNVVFGEPITASLGTDGTHYWSKNWAKAASFVTSPPLSPDPTTPDYLNTLLASG 324

  Fly   334 DLQLTGSDNCTFNKEHKALGKGDFTKIPNGVNGVEDRMSLVWEKGVHAGLLDPCRFVAVTSTNAA 398
            ||.:.||.:|||:...||:||.|||:||.||||.|:|||::|:|.|..|.:|...||||||||||
Zfish   325 DLSVVGSAHCTFSVAQKAIGKDDFTQIPEGVNGAEERMSIIWDKAVVTGKMDENMFVAVTSTNAA 389

  Fly   399 KIFNIYPQKGRIAVGSDADIVIWNPNATRTISKDTHHHACDFNIFEGMTVHGVCEFVLVRGRICA 463
            ||.|:||:|||||||||:|:|||:.:|.|||:..|||.|.::|:||||.:.|....|:.:|:|..
Zfish   390 KILNLYPRKGRIAVGSDSDLVIWDTDAVRTITAKTHHSAAEYNVFEGMELRGAPMLVVCQGKIVL 454

  Fly   464 ERGNVRVAEGFGRFIPTPVRPPFVYDIIEGKVQ-----SQPEEQHEEKQNGSMAKRFAELDIQIP 523
            |.||:....|.|||||....|.|.|..::.:.|     :.|...::.                 |
Zfish   455 EDGNLHATSGTGRFIPCSPFPDFAYKRVKARKQLAILKAVPRGMYDG-----------------P 502

  Fly   524 VQEPISAMLAGNLAMPAEGSLCSTPSVRGRVDGK----RDLQESSFSIS--EE--LDRSGVRACI 580
            |.| .|.|..|           .|||...|....    |:|.:|.|::|  ||  :..:|.|..:
Zfish   503 VSE-FSPMSRG-----------GTPSASTRTSPTKVPVRNLHQSGFTLSGPEEAPIRPAGRRIVV 555

  Fly   581 KVKNPPGGKSS 591
                ||||:|:
Zfish   556 ----PPGGRSN 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRMPNP_730954.2 D-HYD 22..475 CDD:238639 247/452 (55%)
PRK09060 24..483 CDD:181632 252/458 (55%)
dpysl3NP_001018348.1 PRK09060 17..467 CDD:181632 247/453 (55%)
D-HYD 17..466 CDD:238639 247/452 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 505..567 22/74 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 501 1.000 Domainoid score I338
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 561 1.000 Inparanoid score I1059
OMA 1 1.010 - - QHG54576
OrthoDB 1 1.010 - - D174151at33208
OrthoFinder 1 1.000 - - FOG0000315
OrthoInspector 1 1.000 - - otm24326
orthoMCL 1 0.900 - - OOG6_100676
Panther 1 1.100 - - O PTHR11647
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5547
SonicParanoid 1 1.000 - - X218
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1212.010

Return to query results.
Submit another query.