DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2931 and SLIRP1

DIOPT Version :10

Sequence 1:NP_649552.1 Gene:CG2931 / 40673 FlyBaseID:FBgn0037342 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001027083.1 Gene:SLIRP1 / 3772560 FlyBaseID:FBgn0064117 Length:90 Species:Drosophila melanogaster


Alignment Length:80 Identity:29/80 - (36%)
Similarity:40/80 - (50%) Gaps:9/80 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 RIFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVSFREPADFIRAMKE----M 259
            |||.|:|...|..:.|...|.:|.....|.|:.|||||.|||:|||||.......:...|    :
  Fly    16 RIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHIL 80

  Fly   260 DGRYVGSRPIKLRKS 274
            :|.|     :.::||
  Fly    81 EGNY-----LNIQKS 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2931NP_649552.1 RRM_RBM42 192..274 CDD:409817 27/78 (35%)
SLIRP1NP_001027083.1 RRM_SLIRP 16..88 CDD:409688 27/76 (36%)

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