DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2931 and Rbmyf3

DIOPT Version :10

Sequence 1:NP_649552.1 Gene:CG2931 / 40673 FlyBaseID:FBgn0037342 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001257440.1 Gene:Rbmyf3 / 100042881 MGIID:3708825 Length:380 Species:Mus musculus


Alignment Length:93 Identity:33/93 - (35%)
Similarity:51/93 - (54%) Gaps:1/93 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 DDDFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVSFREPADFIRAMKEM 259
            |...:||.|.|......:.|...|.:|....|..::||:.|.||:||.|::||..||...|:|||
Mouse     5 DQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEM 69

  Fly   260 DGRYVGSRPIKLRKSTWRQRSLDVVKKK 287
            :|..:..:.||::::. |..||:...||
Mouse    70 NGVILDGKRIKVKQAR-RPSSLESGSKK 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2931NP_649552.1 RRM_RBM42 192..274 CDD:409817 28/78 (36%)
Rbmyf3NP_001257440.1 RRM_SF 7..86 CDD:473069 27/79 (34%)
PABP-1234 <10..207 CDD:130689 32/88 (36%)

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