DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL44 and Mrpl44

DIOPT Version :9

Sequence 1:NP_649541.1 Gene:mRpL44 / 40656 FlyBaseID:FBgn0037330 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001026820.1 Gene:Mrpl44 / 301552 RGDID:1309556 Length:332 Species:Rattus norvegicus


Alignment Length:322 Identity:110/322 - (34%)
Similarity:172/322 - (53%) Gaps:28/322 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KLLEGSPTVQTRRHIKRWVSPTL-----------RELAHRQKKL-------GPQKPERRSGFVEW 61
            :||:..|     |.:....:|||           |.....||:|       .|..|.|||....|
  Rat     7 RLLQQGP-----RRLLAPAAPTLVPPVRGVKKGFRAAFRFQKELERWRLLRSPPPPVRRSEKPNW 66

  Fly    62 NQRSELFAFGKRLGESFELSELQRAFTEKSFAEREEDRRRQLGIEESD--LQMPHNSDLVEKGQQ 124
            :..:|:.|||.||.|:|.|..|:.||....:.:.||.:|:.||||:..  |.:..|.:|.|:|..
  Rat    67 DYHAEIQAFGSRLQEAFSLDLLKTAFVNSCYIKSEEAKRQNLGIEKEAALLNLKDNQELFEQGLS 131

  Fly   125 IARAYVEAFLQHQLPKVPNEGLQAIASYLLSTETLAHVSTHLGTKDLIQSTEYPPSAESQAKSLH 189
            .:...:..||:.:.|.:|.||::::.::|.....:.||:::|..:.|..|.|:|.......::..
  Rat   132 FSHRCLTQFLEDEFPNLPTEGIESLVNFLTGEAVVCHVASNLAVEQLTLSAEFPVPQPVLRRTFF 196

  Fly   190 AVIGALASSSGIERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKICQERKLGEAEPRLLGDC 254
            ||||||..|||.|||.:|:|||:.||:..|:|.|:||...|:.||.:..::|.:...|.||....
  Rat   197 AVIGALLQSSGPERAALFIRDFLITQMTGKELFEMWTIVNPMGLLVEELKKRNISAPESRLTRQS 261

  Fly   255 GKNTVLAAYQVGIYANRQLLGKGFGEDVKTATETAALDALQSIFDTRDNRRPFDFAIQLEPK 316
            |..|.|..|.||:|.:::|:.:|.||.|..|.|.||..||:.::...:||||:|::   :||
  Rat   262 GSTTALPLYFVGLYCDKRLIAEGPGETVLVAEEEAARVALRKLYGFTENRRPWDYS---KPK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL44NP_649541.1 Rnc 72..296 CDD:223644 82/225 (36%)
RIBOc 81..219 CDD:197778 47/139 (34%)
Mrpl44NP_001026820.1 DSRM 236..304 CDD:294045 25/67 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346104
Domainoid 1 1.000 185 1.000 Domainoid score I3289
eggNOG 1 0.900 - - E1_COG0571
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11293
Inparanoid 1 1.050 186 1.000 Inparanoid score I3834
OMA 1 1.010 - - QHG46411
OrthoDB 1 1.010 - - D533666at33208
OrthoFinder 1 1.000 - - FOG0005847
OrthoInspector 1 1.000 - - oto97505
orthoMCL 1 0.900 - - OOG6_105063
Panther 1 1.100 - - LDO PTHR11207
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6344
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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