DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL44 and Mrpl44

DIOPT Version :10

Sequence 1:NP_649541.1 Gene:mRpL44 / 40656 FlyBaseID:FBgn0037330 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001026820.1 Gene:Mrpl44 / 301552 RGDID:1309556 Length:332 Species:Rattus norvegicus


Alignment Length:322 Identity:110/322 - (34%)
Similarity:172/322 - (53%) Gaps:28/322 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KLLEGSPTVQTRRHIKRWVSPTL-----------RELAHRQKKL-------GPQKPERRSGFVEW 61
            :||:..|     |.:....:|||           |.....||:|       .|..|.|||....|
  Rat     7 RLLQQGP-----RRLLAPAAPTLVPPVRGVKKGFRAAFRFQKELERWRLLRSPPPPVRRSEKPNW 66

  Fly    62 NQRSELFAFGKRLGESFELSELQRAFTEKSFAEREEDRRRQLGIEESD--LQMPHNSDLVEKGQQ 124
            :..:|:.|||.||.|:|.|..|:.||....:.:.||.:|:.||||:..  |.:..|.:|.|:|..
  Rat    67 DYHAEIQAFGSRLQEAFSLDLLKTAFVNSCYIKSEEAKRQNLGIEKEAALLNLKDNQELFEQGLS 131

  Fly   125 IARAYVEAFLQHQLPKVPNEGLQAIASYLLSTETLAHVSTHLGTKDLIQSTEYPPSAESQAKSLH 189
            .:...:..||:.:.|.:|.||::::.::|.....:.||:::|..:.|..|.|:|.......::..
  Rat   132 FSHRCLTQFLEDEFPNLPTEGIESLVNFLTGEAVVCHVASNLAVEQLTLSAEFPVPQPVLRRTFF 196

  Fly   190 AVIGALASSSGIERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKICQERKLGEAEPRLLGDC 254
            ||||||..|||.|||.:|:|||:.||:..|:|.|:||...|:.||.:..::|.:...|.||....
  Rat   197 AVIGALLQSSGPERAALFIRDFLITQMTGKELFEMWTIVNPMGLLVEELKKRNISAPESRLTRQS 261

  Fly   255 GKNTVLAAYQVGIYANRQLLGKGFGEDVKTATETAALDALQSIFDTRDNRRPFDFAIQLEPK 316
            |..|.|..|.||:|.:::|:.:|.||.|..|.|.||..||:.::...:||||:|::   :||
  Rat   262 GSTTALPLYFVGLYCDKRLIAEGPGETVLVAEEEAARVALRKLYGFTENRRPWDYS---KPK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL44NP_649541.1 RIBOc 81..219 CDD:197778 47/139 (34%)
DSRM_MRPL44 217..300 CDD:380703 30/82 (37%)
Mrpl44NP_001026820.1 DSRM_MRPL44 225..307 CDD:380703 30/81 (37%)

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