DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14667 and Repin1

DIOPT Version :10

Sequence 1:NP_001014607.1 Gene:CG14667 / 40643 FlyBaseID:FBgn0037317 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001385832.1 Gene:Repin1 / 445541 RGDID:1549707 Length:607 Species:Rattus norvegicus


Alignment Length:186 Identity:53/186 - (28%)
Similarity:75/186 - (40%) Gaps:19/186 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 PSAAVIAAAEAAAEAAQQED----------LQEQEMERAAKRRSNFFICDECGTLFHDAFLYTEH 195
            |..::...|||.|......|          |:..:.:...:|.   |.|.|||..|........|
  Rat   400 PLGSLRTPAEAPASLHSCTDCGRSFRLERFLRLHQRQHTGERP---FTCTECGKNFGKKTHLVAH 461

  Fly   196 LNGHQNRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQCTICHEAFASLGAKLRHDKAH 260
            ...|...|.    |.|.||.:.|::.:.|..||.. |...|.|.|..|.:||........|.:.|
  Rat   462 SRVHSGERP----FACEECGRRFSQGSHLAAHRRD-HAPERPFVCPDCGKAFRHKPYLAAHRRIH 521

  Fly   261 KNERPYPCLECGMIFSSVSELQNHFSTHSKQIRKFRCEPCNMDFITRRGLVAHTKT 316
            ..|:||.|.:||..||..|.|.:|...|:.: |.:.|..|:..|..:..|:.|.|:
  Rat   522 TGEKPYVCPDCGKAFSQKSNLVSHRRIHTGE-RPYACPDCDRSFSQKSNLITHRKS 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14667NP_001014607.1 zf-AD 6..80 CDD:214871
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
C2H2 Zn finger 211..232 CDD:275368 7/20 (35%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
zf-C2H2_8 <269..313 CDD:464935 13/43 (30%)
C2H2 Zn finger 297..316 CDD:275368 5/18 (28%)
Repin1NP_001385832.1 C2H2 Zn finger 114..134 CDD:275368
C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 173..193 CDD:275368
COG5048 <193..367 CDD:227381
C2H2 Zn finger 202..222 CDD:275368
C2H2 Zn finger 234..254 CDD:275368
C2H2 Zn finger 293..313 CDD:275368
COG5048 <309..580 CDD:227381 53/186 (28%)
C2H2 Zn finger 321..341 CDD:275368
C2H2 Zn finger 349..369 CDD:275368
C2H2 Zn finger 417..437 CDD:275368 2/19 (11%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 473..493 CDD:275368 7/20 (35%)
C2H2 Zn finger 501..521 CDD:275368 5/19 (26%)
C2H2 Zn finger 529..549 CDD:275368 8/19 (42%)
C2H2 Zn finger 557..577 CDD:275368 6/20 (30%)
C2H2 Zn finger 585..605 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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