DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and SDF2

DIOPT Version :10

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:XP_011523408.1 Gene:SDF2 / 6388 HGNCID:10675 Length:230 Species:Homo sapiens


Alignment Length:235 Identity:111/235 - (47%)
Similarity:146/235 - (62%) Gaps:32/235 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILLLTGL-ALVGSISRGAATESNVVTCGSILKLLNSDYAFRLHSHDVKYGSGSGQQSVTGVEQKE 67
            :|||.|| :.||:.|.|      ||||||::||||:.:..|||||||:|||||||||||||...:
Human     6 LLLLGGLWSAVGASSLG------VVTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVD 64

  Fly    68 DVNSHWVIKAQTGELCERGEPIACGSTVRLEHLSTKKNLHSHHFSSPLSGEQ------------- 119
            |.||:|.|:.::..:||||.||.||..:||.|::|.:|||||||:|||||.|             
Human    65 DSNSYWRIRGKSATVCERGTPIKCGQPIRLTHVNTGRNLHSHHFTSPLSGNQRRKQRLKGFTEEG 129

  Fly   120 ------EVSAYGTDGLGDTGDHWEVVCSNENWMRSAHVRLRHIDTGMYLGMSGRSYGRPISGQME 178
                  ||||:|.:|.||..|.|.|:|:...|:|...||.:|..|.:.|.::|..||||||||.|
Human   130 IKLRFKEVSAFGEEGEGDYLDDWTVLCNGPYWVRDGEVRFKHSSTEVLLSVTGEQYGRPISGQKE 194

  Fly   179 IVGVHKPQHGTRWTTAEGLFIVPKE--KSSTHDEYAHSEL 216
            :.|:.:|.....|...||:|:.|.|  |:..|    |:||
Human   195 VHGMAQPSQNNYWKAMEGIFMKPSELLKAEAH----HAEL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 beta-trefoil_MIR_SDF2_meta 27..201 CDD:467764 94/192 (49%)
SDF2XP_011523408.1 beta-trefoil_MIR_SDF2_meta 24..217 CDD:467764 94/192 (49%)

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