DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and Sdf2

DIOPT Version :9

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_033169.3 Gene:Sdf2 / 20316 MGIID:108019 Length:219 Species:Mus musculus


Alignment Length:216 Identity:110/216 - (50%)
Similarity:145/216 - (67%) Gaps:13/216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILLLTGL-ALVGSISRGAATESNVVTCGSILKLLNSDYAFRLHSHDVKYGSGSGQQSVTGVEQKE 67
            :|||.|| :.||      |:...||||||::||||:.:..|||||||:|||||||||||||...:
Mouse    14 LLLLGGLWSAVG------ASNMAVVTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVD 72

  Fly    68 DVNSHWVIKAQTGELCERGEPIACGSTVRLEHLSTKKNLHSHHFSSPLSGEQEVSAYGTDGLGDT 132
            |.||:|.|:.:|..:||||.||.||..:||.|::|.:|||||||:|||||.|||||:|.:|.||.
Mouse    73 DSNSYWRIRGKTATVCERGTPIKCGQPIRLTHINTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDY 137

  Fly   133 GDHWEVVCSNENWMRSAHVRLRHIDTGMYLGMSGRSYGRPISGQMEIVGVHKPQHGTRWTTAEGL 197
            .|.|.|:|:...|:|...||.:|..|.:.|.::|..||||||||.|:.|:.:|.....|...||:
Mouse   138 LDDWTVLCNGPYWVRDGEVRFKHSSTDVLLSVTGEQYGRPISGQKEVHGMAQPSQNNYWKAMEGI 202

  Fly   198 FIVPKE--KSSTHDEYAHSEL 216
            |:.|.|  ::..|    |:||
Mouse   203 FMKPSELLRAEVH----HAEL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 MIR 26..75 CDD:197746 34/48 (71%)
MIR 86..138 CDD:197746 32/51 (63%)
MIR 151..>182 CDD:197746 15/30 (50%)
Sdf2NP_033169.3 MIR 29..80 CDD:197746 34/50 (68%)
MIR 91..146 CDD:197746 33/54 (61%)
MIR 148..197 CDD:197746 19/48 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5186
eggNOG 1 0.900 - - E1_COG1928
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5045
Inparanoid 1 1.050 223 1.000 Inparanoid score I3513
Isobase 1 0.950 - 0 Normalized mean entropy S2064
OMA 1 1.010 - - QHG54450
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002719
OrthoInspector 1 1.000 - - otm43364
orthoMCL 1 0.900 - - OOG6_102590
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2235
SonicParanoid 1 1.000 - - X2096
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.710

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