DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Tim17b1 and tctn-1

Sequence 1:NP_649526.2 Gene:Tim17b1 FlyBaseID:FBgn0037310 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_500628.2 Gene:tctn-1 WormBaseID:WBGene00017120 Length:470 Species:Caenorhabditis elegans

Alignment Length:169 Identity:30/170 (18%)
Similarity:62/170 (36%) Gaps:26/170 (15%)


  Fly    23 MGALGGGAFQAIKGFRNAPSG---LGYRLSGGLAA-----VRARSGLVGGNFAVWGATFSAIDCS 79
            :|...|.....:||....|..   ||...||.:|.     :|:.|.:         .|.|.|:|.
 Worm   259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSGSIAPSPVFFLRSMSSV---------CTISTINCE 314

  Fly    80 LVYFRKK---EDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGVGIVVSHY----S 137
            ....:.:   |..:.:::..:.:.....|..|..::....|....:...:....::..:|    |
 Worm   315 DARAKARAFYEQVYPSVLVSSPSEDAHPASVGRVNVTWEELSPSTISCRLPVSSLLQIYYSKQGS 379

  Fly   138 ADSYRQVSPVERQQRYKQEL--LRQQKGVSPLAATYGEI 174
            ..:||:|......|....::  |..|:...|::.::.|:
 Worm   380 TKNYREVIIAGNSQLLLDDVPYLSGQEIRMPISISFTEV 418

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Tim17b1NP_649526.2 Tim17 1..147 CDD:295283 25/139 (18%)
tctn-1NP_500628.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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