DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and Tinagl1

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_446034.2 Gene:Tinagl1 / 94174 RGDID:70956 Length:467 Species:Rattus norvegicus


Alignment Length:256 Identity:70/256 - (27%)
Similarity:112/256 - (43%) Gaps:49/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 GE-LPKEFDWRQK--DAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKT-GELKE-FSEQELLDCDT 451
            || ||..|:..:|  :.:.:..:||:|...||||.........::.: |.:.. .|.|.||.|||
  Rat   199 GEVLPTAFEASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDT 263

  Fly   452 -TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAK----------------------KNQCHFNR 493
             ....|.||.:|.|:..:: ..|:..:..||:..:                      |.|.....
  Rat   264 HHQKGCRGGRLDGAWWFLR-CRGVVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRC 327

  Fly   494 TLSHV------QVAGFVDLPKGNETAMQEWLLANGPIS--IGINANAMQFYRGGVSH-------P 543
            ..|||      ||.....|....:..|:| |:.|||:.  :.::.:...:.||..||       |
  Rat   328 PNSHVDSNDIYQVTPVYRLASDEKEIMKE-LMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRP 391

  Fly   544 WKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGV 604
            .:   .:::..|.|.:.|:|....|: .:|:.||...|||||.|||:|::|:.||.|.|.:
  Rat   392 EQ---YRRHGTHSVKITGWGEETLPD-GRTIKYWTAANSWGPWWGERGHFRIVRGTNECDI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410
Peptidase_C1A 395..611 CDD:239068 67/252 (27%)
Tinagl1NP_446034.2 Somatomedin_B 53..93 CDD:470596
Peptidase_C1A_CathepsinB 203..455 CDD:239111 67/252 (27%)
Blue background indicates that the domain is not in the aligned region.

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