DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and ctsh

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_997853.1 Gene:ctsh / 324818 ZFINID:ZDB-GENE-030131-3539 Length:330 Species:Danio rerio


Alignment Length:307 Identity:109/307 - (35%)
Similarity:167/307 - (54%) Gaps:19/307 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKY--GITEFADMTSSEYKE 367
            ::.|..:..::.::| ...|...||:||.:|.|.|::.|.   |:.|:  |:.:|:|||.:|:|:
Zfish    27 EYHFKSWMSQYNKKY-EINEFYQRLQIFLENKKRIDQHNE---GNHKFSMGLNQFSDMTFAEFKK 87

  Fly   368 RTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQK-DAVTQVKNQGSCGSCWAFSVTGNIEGLY 431
            ...|.:.....||.|:..   :.:|..|...|||.| ..:|.|||||.|||||.||.||.:|.:.
Zfish    88 TYLLTEPQNCSATRGNHV---SSNGLYPDAIDWRTKGHYITDVKNQGPCGSCWTFSTTGCLESVT 149

  Fly   432 AVKTGELKEFSEQELLDC--DTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRT 494
            |:.||:|.:.:||:|:||  |..:..|||||..:|::.|....||..|.:|||:||..||.|...
Zfish   150 AIATGKLLQLAEQQLIDCAGDFDNHGCNGGLPSHAFEYIMYNKGLMTEDDYPYQAKGGQCRFKPQ 214

  Fly   495 LSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANA-MQFYRGGVSHPWKALCSKKNLDHGVL 558
            |:...|...|::.|.:|..|.:.:....|:|......: ...|:.|:....:...:...::|.||
Zfish   215 LAAAFVKEVVNITKYDEMGMVDAVARLNPVSFAYEVTSDFMHYKDGIYTSTECHNTTDMVNHAVL 279

  Fly   559 VVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVS 605
            .|||...:      ..||||||||||..||.:||:.:.||.|.||::
Zfish   280 AVGYAEEN------GTPYWIVKNSWGTNWGIKGYFYIERGKNMCGLA 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410 18/58 (31%)
Peptidase_C1A 395..611 CDD:239068 84/215 (39%)
ctshNP_997853.1 Inhibitor_I29 30..85 CDD:462410 18/58 (31%)
Peptidase_C1A 112..326 CDD:239068 84/215 (39%)

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