DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and Ctsz

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_899159.1 Gene:Ctsz / 252929 RGDID:708479 Length:306 Species:Rattus norvegicus


Alignment Length:236 Identity:80/236 - (33%)
Similarity:112/236 - (47%) Gaps:43/236 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 ELPKEFDWRQKDAV---TQVKNQ---GSCGSCWAFSVTGNIEGLYAVK-TGELKE--FSEQELLD 448
            :|||.:|||..:.|   :..:||   ..||||||...|..:.....:| .|....  .|.|.::|
  Rat    63 DLPKNWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVID 127

  Fly   449 CDTTDSACNGG----LMDNAYK-AIKDIGGLEYEAEYPYKAKKNQ---------CHF--NRTLSH 497
            |....| |.||    :.:.|:| .|.|.....|:|:.....|.||         ||.  |.||..
  Rat   128 CGNAGS-CEGGNDLPVWEYAHKHGIPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWR 191

  Fly   498 VQVAGFVDLPKGNETAMQEWLLANGPISIGINA-NAMQFYRGGVSHPWKALCSKKNLDHGVLVVG 561
            |...|.:   .|.|..|.| :.||||||.||.| ..|..|.||:...::   ::..::|.:.|.|
  Rat   192 VGDYGSL---SGREKMMAE-IYANGPISCGIMATERMSNYTGGIYTEYQ---NQAIINHIISVAG 249

  Fly   562 YGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV----YRG 598
            :|||     :..:.||||:||||..|||:|:.|:    |:|
  Rat   250 WGVS-----NDGIEYWIVRNSWGEPWGERGWMRIVTSTYKG 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410
Peptidase_C1A 395..611 CDD:239068 79/234 (34%)
CtszNP_899159.1 Peptidase_C1A_CathepsinX 64..305 CDD:239149 80/235 (34%)
Blue background indicates that the domain is not in the aligned region.

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