DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and Ctsh

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_031827.2 Gene:Ctsh / 13036 MGIID:107285 Length:333 Species:Mus musculus


Alignment Length:313 Identity:102/313 - (32%)
Similarity:157/313 - (50%) Gaps:20/313 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 VDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER 368
            ::...:|..::..::..|:.|...||::|..|.:.|:..|... .:.|..:.:|:||:.:|.|.:
Mouse    28 IEKFHFKSWMKQHQKTYSSVEYNHRLQMFANNWRKIQAHNQRN-HTFKMALNQFSDMSFAEIKHK 91

  Fly   369 TGLWQRDEAKATGGSAAVVPAY---HGELPKEFDWRQK-DAVTQVKNQGSCGSCWAFSVTGNIEG 429
            . ||...:     ..:|....|   .|..|...|||:| :.|:.|||||:|||||.||.||.:|.
Mouse    92 F-LWSEPQ-----NCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALES 150

  Fly   430 LYAVKTGELKEFSEQELLDCDT--TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFN 492
            ..|:.:|::...:||:|:||..  .:..|.|||...|::.|....|:..|..|||..|.:.|.||
Mouse   151 AVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFN 215

  Fly   493 RTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANA-MQFYRGGVSHPWKALCSKKNLDHG 556
            ...:...|...|::...:|.||.|.:....|:|....... ...|:.||........:...::|.
Mouse   216 PQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHA 280

  Fly   557 VLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMAT 609
            ||.||||..:      .|.|||||||||.:|||.||:.:.||.|.||::..|:
Mouse   281 VLAVGYGEQN------GLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACAS 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410 13/56 (23%)
Peptidase_C1A 395..611 CDD:239068 82/219 (37%)
CtshNP_031827.2 Inhibitor_I29 33..88 CDD:462410 13/55 (24%)
Peptidase_C1A 115..329 CDD:239068 82/219 (37%)

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