DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and ube2s

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001016438.1 Gene:ube2s XenbaseID:XB-GENE-1008017 Length:211 Species:Xenopus tropicalis

Alignment Length:140 Identity:47/141 (33%)
Similarity:75/141 (53%) Gaps:0/141 (0%)


  Fly     7 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVR 71
            |::.::...|..|||.|:...|.:.:|......|.||..||:..|.|::.:...:::|..||...
 Frog    14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGY 78

  Fly    72 FVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRRE 136
            |::|:|||||..:|.||:::|:..|.....:..:|.:|:.||..|||.|..|..|.:|..||..|
 Frog    79 FLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEE 143

  Fly   137 YEKRVKACVE 146
            |..|.:...|
 Frog   144 YASRARLMTE 153

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 45/137 (33%)
ube2sNP_001016438.1 UQ_con 16..150 CDD:278603 45/134 (34%)
COG5078 18..156 CDD:227410 46/137 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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