DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and cdc34b

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002688.1 Gene:cdc34b ZFINID:ZDB-GENE-040718-439 Length:239 Species:Danio rerio

Alignment Length:158 Identity:60/159 (38%)
Similarity:91/159 (57%) Gaps:20/159 (13%)


  Fly     5 ARRRLMRDFKRLQEDPPTGVSGAPTDN-NIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 68
            :::.||.:.|.|||:|..|......|. ::..|...||||.:|.:|.|.||..|:|..:||..||
Zfish    12 SQKALMLEMKSLQEEPVEGFKITLVDEADLYNWEVAIFGPPNTHYEGGYFKARIKFPVDYPYSPP 76

  Fly    69 TVRFVSKVFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLSDPNPNS 120
            |.||::|::|||:|.:|.:|:.||             ..||:||.:|..||.|:.|||::||..|
Zfish    77 TFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFS 141

  Fly   121 PANSTAAQLYKENR------REYEKRVK 142
            |||..|:.:|::.|      |||.:.::
Zfish   142 PANVDASVMYRKWRDSKGKDREYAEIIR 169

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 60/156 (38%)
cdc34bNP_001002688.1 COG5078 9..172 CDD:227410 60/159 (38%)
UBCc 14..172 CDD:238117 60/157 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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